Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra016526.1-P | |
| Bra025708.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G79690.1 | Bra016526.1-P | AT1G19050.1 | 18642946 |
| AT1G79690.1 | Bra025708.1-P | AT1G19050.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87361 | Canola | cytosol | 99.87 | 88.85 |
| Bra003597.1-P | Field mustard | cytosol | 86.95 | 88.79 |
| AT1G79690.1 | Thale cress | cytosol | 86.69 | 86.92 |
| KRH18624 | Soybean | nucleus | 10.98 | 72.03 |
| KRG89751 | Soybean | extracellular | 23.39 | 70.16 |
| VIT_09s0018g01600.t01 | Wine grape | cytosol | 70.28 | 69.57 |
| Solyc08g075390.2.1 | Tomato | extracellular | 68.6 | 67.82 |
| KRH18626 | Soybean | cytosol, nucleus | 55.81 | 67.61 |
| Os02t0793300-01 | Rice | cytosol | 67.31 | 67.14 |
| TraesCS6A01G354100.2 | Wheat | golgi, unclear | 66.02 | 65.85 |
| TraesCS6B01G387000.1 | Wheat | cytosol | 66.02 | 65.85 |
| TraesCS6D01G336400.3 | Wheat | cytosol | 66.02 | 65.85 |
| Zm00001d052050_P001 | Maize | cytosol | 64.47 | 63.16 |
| GSMUA_Achr10P... | Banana | cytosol | 66.54 | 61.46 |
| OQU85861 | Sorghum | mitochondrion | 67.18 | 61.39 |
| HORVU6Hr1G084590.1 | Barley | plastid | 65.76 | 57.45 |
| TraesCS5A01G366500.1 | Wheat | cytosol | 5.3 | 56.94 |
| Zm00001d018361_P001 | Maize | plastid | 4.26 | 32.35 |
| TraesCS1D01G416700.1 | Wheat | plastid | 5.3 | 15.02 |
Protein Annotations
| EnsemblPlants:Bra035136.1 | EnsemblPlants:Bra035136.1-P | EnsemblPlantsGene:Bra035136 | Gene3D:3.90.79.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:IPR000086 | InterPro:NUDIX_hydrolase-like_dom_sf | InterPro:NUDIX_hydrolase_dom | PANTHER:PTHR23422 | PANTHER:PTHR23422:SF9 |
| PFAM:PF00293 | PFAM:PF03571 | PFscan:PS51462 | SEG:seg | SUPFAM:SSF55811 | UniParc:UPI0002541DBC |
| UniProt:M4F239 | MapMan:35.1 | : | : | : | : |
Description
AT1G79690 (E=0.0) atnudt3 | atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3); hydrolase
Coordinates
chrA07:+:22320974..22325549
Molecular Weight (calculated)
87741.0 Da
IEP (calculated)
5.007
GRAVY (calculated)
-0.306
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEHFDVLT NSGEKTEVIW TIANVYVFPW SKVHQDGDYH RAVNVWIFVE STQELVLQRR SDDKDSWPGR WDISSAGHIS AGDPSLISAQ RELEEELGIK
101: LPKDAFEKLF VFLQECVLND GKFINNEFND VYLVTILHPI PLEAFTLQKE EVSAVKYIHY EEYRNLLSKK DPAYVPYDLN GYGKLFHIIR QRCQVNTEAR
201: SLSLQKQLQR YSPVTLEANL TELSEADQKA LGLILKAAKV IDDIFYEQLW HSNPALRDWL KEHANASELD TLKWKYFLIN KSPWSSLDEN EPYLSTADSA
301: AKFLPEATKP IDGWKGIEYR AAFPLTKPPG GNFYPPDMDK MEFTSWLSSL TEEQKRAATG FFSVIKRRSE ANLDASLSDH LSDSNSDLYS SPYSEIYQPF
401: LTKASELLHK AGDLVTSQSL KKLLHSKAEA FLSNDYYESD IAWMDLDSKL DITIGPYETY EDEMFGYKAS FEAFIGIRDD KATADLKLFG DNLKLLEDNL
501: PLDSVYKSKD VSAAPIRVIQ LIYNSGDVNG PQTVAFNLPN DEKIVKERGT SMVMLKNVQE AKFEHILKPI AEIIISKEQR GFVDFDSFFT HTICHECCHG
601: IGPHSITLPD GRTSSVRKEL QDVYSAVEEA KADIVGLWAL KFLITKGLLS KSMEESMYVS FLAGCFRSIR FGLTEAHGKG QALQFNWLYE KGAFVFHKDS
701: TFSVDFTKIE DAVESLSREI LTIQGRGDKN AATLLLNKYC TITGPLKTAL EKLESVKVPV DISPTFPLAK TLLN
101: LPKDAFEKLF VFLQECVLND GKFINNEFND VYLVTILHPI PLEAFTLQKE EVSAVKYIHY EEYRNLLSKK DPAYVPYDLN GYGKLFHIIR QRCQVNTEAR
201: SLSLQKQLQR YSPVTLEANL TELSEADQKA LGLILKAAKV IDDIFYEQLW HSNPALRDWL KEHANASELD TLKWKYFLIN KSPWSSLDEN EPYLSTADSA
301: AKFLPEATKP IDGWKGIEYR AAFPLTKPPG GNFYPPDMDK MEFTSWLSSL TEEQKRAATG FFSVIKRRSE ANLDASLSDH LSDSNSDLYS SPYSEIYQPF
401: LTKASELLHK AGDLVTSQSL KKLLHSKAEA FLSNDYYESD IAWMDLDSKL DITIGPYETY EDEMFGYKAS FEAFIGIRDD KATADLKLFG DNLKLLEDNL
501: PLDSVYKSKD VSAAPIRVIQ LIYNSGDVNG PQTVAFNLPN DEKIVKERGT SMVMLKNVQE AKFEHILKPI AEIIISKEQR GFVDFDSFFT HTICHECCHG
601: IGPHSITLPD GRTSSVRKEL QDVYSAVEEA KADIVGLWAL KFLITKGLLS KSMEESMYVS FLAGCFRSIR FGLTEAHGKG QALQFNWLYE KGAFVFHKDS
701: TFSVDFTKIE DAVESLSREI LTIQGRGDKN AATLLLNKYC TITGPLKTAL EKLESVKVPV DISPTFPLAK TLLN
001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
Arabidopsis Description
NUDT3NUDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.