CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX83788
CDX96681
CDY26701
CDY41014

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G79690.1	CDX83788	AT1G19050.1	18642946
AT1G79690.1	CDX96681	AT1G19050.1	18642946
AT1G79690.1	CDY26701	AT1G19050.1	18642946
AT1G79690.1	CDY41014	AT1G19050.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035136.1-P	Field mustard	cytosol	88.85	99.87
CDX88559	Canola	cytosol	85.86	96.26
CDX67981	Canola	cytosol	79.31	88.92
CDX79337	Canola	cytosol	78.85	88.4
AT1G79690.1	Thale cress	cytosol	77.36	87.18
KRH18624	Soybean	nucleus	9.77	72.03
KRG89751	Soybean	extracellular	20.8	70.16
VIT_09s0018g01600.t01	Wine grape	cytosol	62.64	69.69
Solyc08g075390.2.1	Tomato	extracellular	61.26	68.07
KRH18626	Soybean	cytosol, nucleus	49.77	67.76
Os02t0793300-01	Rice	cytosol	59.89	67.14
TraesCS6D01G336400.3	Wheat	cytosol	58.74	65.85
TraesCS6B01G387000.1	Wheat	cytosol	58.74	65.85
TraesCS6A01G354100.2	Wheat	golgi, unclear	58.74	65.85
Zm00001d052050_P001	Maize	cytosol	57.36	63.16
GSMUA_Achr10P...	Banana	cytosol	59.2	61.46
OQU85861	Sorghum	mitochondrion	59.77	61.39
HORVU6Hr1G084590.1	Barley	plastid	58.51	57.45
TraesCS5A01G366500.1	Wheat	cytosol	4.71	56.94
Zm00001d018361_P001	Maize	plastid	3.79	32.35
TraesCS1D01G416700.1	Wheat	plastid	4.71	15.02

Protein Annotations

EnsemblPlants:CDX87361	EnsemblPlantsGene:GSBRNA2T00146329001	Gene3D:3.90.79.10	GO:A0A078DDL7	GO:GO:0003674	GO:GO:0003824
GO:GO:0016787	InterPro:IPR000086	InterPro:NUDIX_hydrolase-like_dom_sf	InterPro:NUDIX_hydrolase_dom	PANTHER:PTHR23422	PANTHER:PTHR23422:SF9
PFAM:PF00293	PFAM:PF03571	PFscan:PS51462	ProteinID:CDX87361	ProteinID:CDX87361.1	SEG:seg
SUPFAM:SSF55811	TMHMM:TMhelix	UniParc:UPI0004EE630B	MapMan:35.1	:	:

Description

BnaA07g35120D

Coordinates

chrLK031850:-:278742..287999

Molecular Weight (calculated)

98138.4 Da

IEP (calculated)

5.055

GRAVY (calculated)

-0.184

Length

870 amino acids

Sequence
(BLAST)

001: MVEEHFDVLT NSGEKTEVIW TIANVYVFPW SKVHQDGDYH RAVNVWIFVE STQELVLQRR SDDKDSWPGR WDISSAGHIS AGDPSLISAQ RELEEELGIK
101: LPKDAFEKLF VFLQECVLND GKFINNEFND VYLVTILHPI PLEAFFFFFF SFMPIIFSSL SFSFPLPLPS CTPLFSIVFS TSVTISTASI TLVSCKFLSF
201: SISFPTSKSF TTSTSFPFPS PSSSTSFSCL LFPSDNSTSS FTLQKEEVSA VKYIHYEEYR NLLSKKDPAY VPYDLNGYGK LFHIIRQRCQ VNTEARSLSL
301: QKQLQRYSPV TLEANLTELS EADQKALGLI LKAAKVIDDI FYEQLWHSNP ALRDWLKEHA NASELDTLKW KYFLINKSPW SSLDENEPYL STADSAAKFL
401: PEATKPIDGW KGIEYRAAFP LTKPPGGNFY PPDMDKMEFT SWLSSLTEEQ KRAATGFFSV IKRRSEANLD ASLSDHLSDS NSDLYSSPYS EIYQPFLTKA
501: SELLHKAGDL VTSQSLKKLL HSKAEAFLSN DYYESDIAWM DLDSKLDITI GPYETYEDEM FGYKASFEAF IGIRDDKATA DLKLFGDNLK LLEDNLPLDS
601: VYKSKDVSAA PIRVIQLIYN SGDVNGPQTV AFNLPNDEKI VKERGTSMVM LKNVQEAKFE HILKPIAEII ISKEQRGLVD FDSFFTHTIC HECCHGIGPH
701: SITLPDGRTS SVRKELQDVY SAVEEAKADI VGLWALKFLI TKGLLSKSME ESMYVSFLAG CFRSIRFGLT EAHGKGQALQ FNWLYEKGAF VFHKDSTFSV
801: DFTKIEDAVE SLSREILTIQ GRGDKNAATL LLNKYCTITG PLKTALEKLE SVKVPVDISP TFPLAKTLLN

Best Arabidopsis Sequence Match ( AT1G79690.1 )
(BLAST)

001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN

Arabidopsis Description

NUDT3NUDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.