Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G366500.1 | Wheat | cytosol | 29.41 | 41.67 |
| Zm00001d052050_P001 | Maize | cytosol | 55.88 | 7.22 |
| TraesCS6B01G387000.1 | Wheat | cytosol | 47.06 | 6.19 |
| TraesCS6A01G354100.2 | Wheat | golgi, unclear | 47.06 | 6.19 |
| Os02t0793300-01 | Rice | cytosol | 47.06 | 6.19 |
| TraesCS6D01G336400.3 | Wheat | cytosol | 46.08 | 6.06 |
| KRH18626 | Soybean | cytosol, nucleus | 36.27 | 5.79 |
| OQU85861 | Sorghum | mitochondrion | 47.06 | 5.67 |
| Bra003597.1-P | Field mustard | cytosol | 37.25 | 5.01 |
| Solyc08g075390.2.1 | Tomato | extracellular | 38.24 | 4.98 |
| CDX79337 | Canola | cytosol | 37.25 | 4.9 |
| CDX67981 | Canola | cytosol | 37.25 | 4.9 |
| GSMUA_Achr10P... | Banana | cytosol | 40.2 | 4.89 |
| VIT_09s0018g01600.t01 | Wine grape | cytosol | 37.25 | 4.86 |
| HORVU6Hr1G084590.1 | Barley | plastid | 40.2 | 4.63 |
| AT1G79690.1 | Thale cress | cytosol | 34.31 | 4.53 |
| CDX88559 | Canola | cytosol | 33.33 | 4.38 |
| Bra035136.1-P | Field mustard | cytosol | 32.35 | 4.26 |
| CDX87361 | Canola | cytosol | 32.35 | 3.79 |
| KRG89751 | Soybean | extracellular | 0.0 | 0.0 |
| KRH18624 | Soybean | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d018361_P001 | EnsemblPlants:Zm00001d018361_T001 | EnsemblPlantsGene:Zm00001d018361 | Gene3D:3.90.79.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:NUDIX_hydrolase-like_dom_sf | ProteinID:AQK75715.1 | SUPFAM:SSF55811 | UniParc:UPI0008459253 | UniProt:A0A1D6HN29 |
| MapMan:35.2 | : | : | : | : | : |
Description
Nudix hydrolase 3
Coordinates
chr5:+:219166361..219166669
Molecular Weight (calculated)
11356.5 Da
IEP (calculated)
6.242
GRAVY (calculated)
-0.337
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPGAPEE RLGVLTPQCL REKTGISEPR HAPVPEPNSP VSVGFLRSDR VISSLACFVF LRSEVHRDGN YHRAVNVWIY SESTGELLLQ RRADCEELWP
101: GQ
101: GQ
001: MLELRLVQGS LLKKVLEAVK DLVNDANFDC STTGFSLQAM DSSHVALVSL LLRSEGFEHY RCDRNLSMGM NLGNMSKMLK CAGNDDIITI KADDGSDTVT
101: FMFESPTQDK IADFEMKLMD IDSEHLGIPD AEYHSIVRMP SGEFSRICKD LSSIGDTVVI SVTKEGVKFS TAGDIGTANI VLRQNTTVDK PEDAIVIEMN
201: EPVSLSFALR YMNSFTKATP LSETVTISLS SELPVVVEYK VAEMGYIRYY LAPKIEEEED TKPE
101: FMFESPTQDK IADFEMKLMD IDSEHLGIPD AEYHSIVRMP SGEFSRICKD LSSIGDTVVI SVTKEGVKFS TAGDIGTANI VLRQNTTVDK PEDAIVIEMN
201: EPVSLSFALR YMNSFTKATP LSETVTISLS SELPVVVEYK VAEMGYIRYY LAPKIEEEED TKPE
Arabidopsis Description
PCNA2Proliferating cell nuclear antigen 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW35]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.