Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G79690.1 | KRH03376 | AT1G19050.1 | 18642946 |
| AT1G79690.1 | KRH54462 | AT1G19050.1 | 18642946 |
| AT1G79690.1 | KRH57009 | AT1G19050.1 | 18642946 |
| AT1G79690.1 | KRH63457 | AT1G19050.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18624 | Soybean | nucleus | 30.23 | 66.1 |
| VIT_09s0018g01600.t01 | Wine grape | cytosol | 76.36 | 25.19 |
| Solyc08g075390.2.1 | Tomato | extracellular | 73.26 | 24.14 |
| AT1G79690.1 | Thale cress | cytosol | 71.32 | 23.83 |
| Bra003597.1-P | Field mustard | cytosol | 69.77 | 23.75 |
| Bra035136.1-P | Field mustard | cytosol | 70.16 | 23.39 |
| CDX88559 | Canola | cytosol | 70.16 | 23.32 |
| CDX67981 | Canola | cytosol | 69.77 | 23.2 |
| CDX79337 | Canola | cytosol | 69.77 | 23.2 |
| Os02t0793300-01 | Rice | cytosol | 69.77 | 23.2 |
| Zm00001d052050_P001 | Maize | cytosol | 70.54 | 23.04 |
| TraesCS6A01G354100.2 | Wheat | golgi, unclear | 68.6 | 22.81 |
| TraesCS6B01G387000.1 | Wheat | cytosol | 68.6 | 22.81 |
| TraesCS6D01G336400.3 | Wheat | cytosol | 68.6 | 22.81 |
| GSMUA_Achr10P... | Banana | cytosol | 70.54 | 21.72 |
| OQU85861 | Sorghum | mitochondrion | 70.54 | 21.49 |
| CDX87361 | Canola | cytosol | 70.16 | 20.8 |
| HORVU6Hr1G084590.1 | Barley | plastid | 68.99 | 20.09 |
| KRH18626 | Soybean | cytosol, nucleus | 44.96 | 18.15 |
| TraesCS1D01G416700.1 | Wheat | plastid | 8.14 | 7.69 |
| TraesCS5A01G366500.1 | Wheat | cytosol | 0.0 | 0.0 |
| Zm00001d018361_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02012267 | EnsemblPlants:KRG89751 | EnsemblPlantsGene:GLYMA_20G046400 | PANTHER:PTHR23422 | PANTHER:PTHR23422:SF9 | ProteinID:KRG89751 |
| ProteinID:KRG89751.1 | ProteinID:KRG89752.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0006EDEF97 | UniProt:A0A0R0EI08 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:8611056..8614299
Molecular Weight (calculated)
28674.5 Da
IEP (calculated)
4.787
GRAVY (calculated)
0.094
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLSLTCESV LVIALQFFCA TFEAYIGIRD DEATAQLKLL GDYLLDVKGP QTLAFNLPND EHIVKDRGSS MVMLKNVSEA KFKHILLPIA AACVAKEQQE
101: HVDFESFFTR SICHECCHGI GPHTITLPNG QKSTELQEFY SALEEAKADI VGLWALRFLI SQDLLSDSLL KSMYVSFLAG CFQSVRFGLE EAHGKGQALQ
201: FNWLYEKGAF VWDSEGTISV DFTKIEGAIE SLSREILTIQ AKGDKENAGL LLQKYCVG
101: HVDFESFFTR SICHECCHGI GPHTITLPNG QKSTELQEFY SALEEAKADI VGLWALRFLI SQDLLSDSLL KSMYVSFLAG CFQSVRFGLE EAHGKGQALQ
201: FNWLYEKGAF VWDSEGTISV DFTKIEGAIE SLSREILTIQ AKGDKENAGL LLQKYCVG
001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
Arabidopsis Description
NUDT3NUDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.