Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra016526.1-P | |
| Bra025708.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G79690.1 | Bra016526.1-P | AT1G19050.1 | 18642946 |
| AT1G79690.1 | Bra025708.1-P | AT1G19050.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67981 | Canola | cytosol | 100.0 | 97.68 |
| AT1G79690.1 | Thale cress | cytosol | 90.9 | 89.25 |
| Bra035136.1-P | Field mustard | cytosol | 88.79 | 86.95 |
| VIT_09s0018g01600.t01 | Wine grape | cytosol | 72.56 | 70.33 |
| Solyc08g075390.2.1 | Tomato | extracellular | 72.16 | 69.86 |
| KRG89751 | Soybean | extracellular | 23.75 | 69.77 |
| KRH18626 | Soybean | cytosol, nucleus | 57.92 | 68.7 |
| Os02t0793300-01 | Rice | cytosol | 68.87 | 67.27 |
| KRH18624 | Soybean | nucleus | 10.42 | 66.95 |
| TraesCS6B01G387000.1 | Wheat | cytosol | 67.81 | 66.24 |
| TraesCS6A01G354100.2 | Wheat | golgi, unclear | 67.68 | 66.11 |
| TraesCS6D01G336400.3 | Wheat | cytosol | 67.68 | 66.11 |
| Zm00001d052050_P001 | Maize | cytosol | 66.36 | 63.67 |
| GSMUA_Achr10P... | Banana | cytosol | 68.87 | 62.29 |
| OQU85861 | Sorghum | mitochondrion | 68.6 | 61.39 |
| TraesCS5A01G366500.1 | Wheat | cytosol | 5.8 | 61.11 |
| HORVU6Hr1G084590.1 | Barley | plastid | 67.02 | 57.34 |
| Zm00001d018361_P001 | Maize | plastid | 5.01 | 37.25 |
| TraesCS1D01G416700.1 | Wheat | plastid | 5.54 | 15.38 |
Protein Annotations
| EnsemblPlants:Bra003597.1 | EnsemblPlants:Bra003597.1-P | EnsemblPlantsGene:Bra003597 | Gene3D:3.90.79.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:IPR000086 | InterPro:NUDIX_hydrolase-like_dom_sf | InterPro:NUDIX_hydrolase_dom | ncoils:Coil | PANTHER:PTHR23422 |
| PANTHER:PTHR23422:SF9 | PFAM:PF00293 | PFAM:PF03571 | PFscan:PS51462 | SUPFAM:SSF55811 | UniParc:UPI000254136D |
| UniProt:M4CHB4 | MapMan:35.1 | : | : | : | : |
Description
AT1G79690 (E=1e-307) atnudt3 | atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3); hydrolase
Coordinates
chrA07:-:13979891..13984196
Molecular Weight (calculated)
85491.4 Da
IEP (calculated)
4.962
GRAVY (calculated)
-0.296
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEHFDVLT KSGEKTGVSK PRHVSEIHRD GDYHRAVHVW IFVESTQELL LQLRSDDKDS WPGQWDISSA GHISAGDPSL ISAQRELEEE LGIKLPKDAF
101: EKIFVFLQEC VTNNGKFINN EFNDVYLVTV LHPIPLEAFT LQKEEVSAVK YIPYEEYRSL LAKEDPAYVP YDVNGDYGKL FEIIRQRYSP VTLEAKLTEL
201: SEADQKALGL IVKAAKVIDD IFYEQLWYSN PALRAWLKEH ANASELDKLK WDYFLINKSP WSSLDENEPF LTTADSAVKL LPQATKPIAG WKGIEYRAAF
301: PLTKPPGANF YPPDMDKMEF NLWLSSLTEE QKHAATGFFS TIKRRSEANL DASQSDHLAN ITKKLPDSNS DLYSVPYSEI YRPFLTKASD LLHKAGDLAT
401: SQSLKKLLHS KAEAFLSNDY YESDIAWMDL DSKLDITIGP YETYEDEIFG YKASFEAFIG IRDDKATADL KLFGDNLKLL EDNLPLDSVY KSKDVSAAPI
501: RVIQLIYNSG DVKGPQTVAY NLPNDEKIVK DRGTSMVMLK NVQEAKFEHI LKPIAEVIIS KEQRGFVDFD SFFTHTICHE CCHGIGPHTI TLPDGQTSTV
601: RKELQELHSA MEEAKADIVG LWALKFLITK GLLPKSMVES MYVSFLAGCF RSIRFGLTEA HGKGQALQFN WLYEKGAFVF HEDSTFSVDF SKVEDAVESL
701: SHEILTIQGR GDKKAATLLL NNYCTITGPL KTSLEKLESV KVPVDISPTF PLADALMN
101: EKIFVFLQEC VTNNGKFINN EFNDVYLVTV LHPIPLEAFT LQKEEVSAVK YIPYEEYRSL LAKEDPAYVP YDVNGDYGKL FEIIRQRYSP VTLEAKLTEL
201: SEADQKALGL IVKAAKVIDD IFYEQLWYSN PALRAWLKEH ANASELDKLK WDYFLINKSP WSSLDENEPF LTTADSAVKL LPQATKPIAG WKGIEYRAAF
301: PLTKPPGANF YPPDMDKMEF NLWLSSLTEE QKHAATGFFS TIKRRSEANL DASQSDHLAN ITKKLPDSNS DLYSVPYSEI YRPFLTKASD LLHKAGDLAT
401: SQSLKKLLHS KAEAFLSNDY YESDIAWMDL DSKLDITIGP YETYEDEIFG YKASFEAFIG IRDDKATADL KLFGDNLKLL EDNLPLDSVY KSKDVSAAPI
501: RVIQLIYNSG DVKGPQTVAY NLPNDEKIVK DRGTSMVMLK NVQEAKFEHI LKPIAEVIIS KEQRGFVDFD SFFTHTICHE CCHGIGPHTI TLPDGQTSTV
601: RKELQELHSA MEEAKADIVG LWALKFLITK GLLPKSMVES MYVSFLAGCF RSIRFGLTEA HGKGQALQFN WLYEKGAFVF HEDSTFSVDF SKVEDAVESL
701: SHEILTIQGR GDKKAATLLL NNYCTITGPL KTSLEKLESV KVPVDISPTF PLADALMN
001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN
Arabidopsis Description
NUDT3NUDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.