CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0793300-01	Rice	cytosol	81.58	89.05
TraesCS6B01G387000.1	Wheat	cytosol	81.11	88.53
TraesCS6D01G336400.3	Wheat	cytosol	80.99	88.4
TraesCS6A01G354100.2	Wheat	golgi, unclear	80.99	88.4
HORVU6Hr1G084590.1	Barley	plastid	80.05	76.52
KRH18624	Soybean	nucleus	10.04	72.03
TraesCS5A01G366500.1	Wheat	cytosol	6.02	70.83
KRG89751	Soybean	extracellular	21.49	70.54
VIT_09s0018g01600.t01	Wine grape	cytosol	63.99	69.31
Solyc08g075390.2.1	Tomato	extracellular	63.64	68.84
Bra003597.1-P	Field mustard	cytosol	61.39	68.6
KRH18626	Soybean	cytosol, nucleus	51.71	68.54
CDX67981	Canola	cytosol	62.46	68.17
GSMUA_Achr10P...	Banana	cytosol	67.3	68.02
CDX79337	Canola	cytosol	62.22	67.91
AT1G79690.1	Thale cress	cytosol	61.28	67.23
Bra035136.1-P	Field mustard	cytosol	61.39	67.18
CDX88559	Canola	cytosol	61.39	67.01
CDX87361	Canola	cytosol	61.39	59.77
Zm00001d018361_P001	Maize	plastid	5.67	47.06

Protein Annotations

Gene3D:3.90.79.10	MapMan:35.1	UniProt:A0A1Z5RQJ7	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829
GO:GO:0016787	InterPro:IPR000086	InterPro:NUDIX_hydrolase-like_dom_sf	InterPro:NUDIX_hydrolase_dom	EnsemblPlants:OQU85861	ProteinID:OQU85861
ProteinID:OQU85861.1	PFAM:PF00293	PFAM:PF03571	PFscan:PS51462	PANTHER:PTHR23422	PANTHER:PTHR23422:SF9
EnsemblPlantsGene:SORBI_3004G327500	SUPFAM:SSF55811	UniParc:UPI000B8BAA27	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:66217051..66227389

Molecular Weight (calculated)

95500.0 Da

IEP (calculated)

5.124

GRAVY (calculated)

-0.325

Length

847 amino acids

Sequence
(BLAST)

001: MMGRAHGKAG RASAVLYFFY SRFVFVLCRR LLPRERDYTN CFEQSIYPIA QQRFAFSLHS TPTRSAASAA VLMAAAPEEH LDVLNAAGEK TGVSKPRSEV
101: HRDGDYHRAV HVWIYSESTG ELLLQRRADC KDSWPGQWDI SSAGHISAGD SSLFSAQREL EEELGINLPV DAFELLFVFL QECVINNGTY TNNEYNDVYL
201: VTTLTPIPLE AFTLQESEVS AVRYMRCDEY KSCLAKESGE FVPYDVNGQY GQLFSIIEER YKENTESRCL TLQKQMNRYA PIHLEPDLTS LSEGDREALG
301: YILEAAIVID DIFYEQVWNS NKMLRDWLKA HSESSSFDKL KWAYHSINKS PWSCLDENKA FLSTADSAVK LLTDATKPVS GWKGIEYRAA FPLEKPPGAN
401: FYPPDMDKAE FELWKSSLTD KEQKDATGFF TVIKRHDSLS SSSLTQLDGS DQTKTKDDLF IVPYSKEYRP ALEKAAELLE KASACSDSPS LKNLLRTKAN
501: AFLSNDYYES DIAWMELDSN LDLTIGPYET YEDGLFSYKA TFEAFVGIRD DTATSQVKLF GDQLQDLEKN LPMDNIFKSD SISAAPIRVI NLLYNSGDVK
601: GPQTIAFNLP NDERIVNERG TCMVMLKNIS EAKFKHILKP IADACIREEQ KEYVDFEPYY THIVCHECCH GIGPHSITLP SGKKSTVRRE LQEFYSALEE
701: AKADIVGLWA LNFLIKKGLL PKSLSQSMYV SFLASCFRSI RFGLEEAHGK GQALQFNWLY EKGALVLHSD GKFSVDFTKV EEAVESLSRE ILTIQAKGDK
801: PSAQSLLQSR ATLTQPLRVA LEKIEHMQVP VDIAPIFGTA NKLLANV

Best Arabidopsis Sequence Match ( AT1G79690.1 )
(BLAST)

001: MAEEHFDVLT KSGEKTGVSK PRGEVHRDGD YHRAVHVWIF VETTQQLLLQ LRSDDKDSWP GQWDISSAGH ISAGDTSLLS AQRELEEELG VKLPKDAFEK
101: IFVFLQECVT NDGKFINNEF NDVYLVTILH PIPLEAFTLQ KEEVSAVKYV PYEEYRNFLS KEDPAYVPYD VNGEYGKLFD IIRQRCQVNT EARSLSLQKQ
201: LQRYSPVTLE AKLTELSEAD QKALGLIVKA AKIMDDIFYE QVWNSNPALR DWLKDHANAS KLDKLKWDYF TINKSPWSSL DENEAFLSTA DSAVKLLPGA
301: TKAIAGWKGL EYRAAFPVTK PPGANFYPPD MDKMEFTLWL NGLTEEQKHA ATGFFSVIKR RSEANLDASD HLASSTKKLP DSNSDLYSIP YSEIYRPFLK
401: KASEFLQKAG DLVSSPSLKK LLHSKAEAFL SNEYYESDIA WMDLDSKLDI TIGPYETYED EIFGYKATFE TFIGIRDDKA TADLKLFGDN LKLLEDNLPL
501: ESVYKSTDVS AAPIRVIQLI YNSGDVKGPQ TVAYNLPNDE KIVKDRGTSM VMLKNVQEAK FEHILKPIAE ITISKEQRGL VDFDSFFTHT ICHECCHGIG
601: PHTITLPGGQ TSTVRKELQE VHSAMEEAKA DIVGLWALKF LITKGLLSKS MVESMYVSFL AGCFRSIRFG LTEAHGKGQA LQFNYLYEKG AFVFHEDSTF
701: SVDFAKIEGA VESLSHEILT IQGKGDKNAA TLLLNKYCTI TGPLKTALEN LERVKVPVDI SPTFPLAEAL MN

Arabidopsis Description

NUDT3NUDT3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDC8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.