Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025708.1-P | Field mustard | nucleus | 95.33 | 95.77 |
| CDY26701 | Canola | nucleus | 95.33 | 95.77 |
| CDX96681 | Canola | cytosol | 81.78 | 84.54 |
| CDX83788 | Canola | cytosol | 83.64 | 84.43 |
| AT1G19050.1 | Thale cress | cytosol | 80.37 | 83.5 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 62.15 | 75.14 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 64.02 | 74.46 |
| CDX68161 | Canola | cytosol | 66.36 | 72.08 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 54.67 | 65.36 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 55.61 | 65.03 |
| CDY36905 | Canola | nucleus | 55.61 | 65.03 |
| CDY70164 | Canola | nucleus | 55.61 | 65.03 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 64.95 | 63.76 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 54.67 | 63.59 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 53.74 | 62.84 |
| CDX84366 | Canola | nucleus | 53.27 | 60.0 |
| CDY00336 | Canola | nucleus | 53.27 | 60.0 |
| Solyc03g113720.2.1 | Tomato | nucleus | 54.21 | 59.49 |
| PGSC0003DMT400063187 | Potato | cytosol | 53.74 | 57.5 |
| KRH57009 | Soybean | nucleus | 54.67 | 55.45 |
| KRH03376 | Soybean | nucleus | 53.27 | 55.07 |
| KRH63457 | Soybean | cytosol | 52.34 | 54.9 |
| CDY71200 | Canola | cytosol | 31.78 | 53.54 |
| CDY59626 | Canola | cytosol | 31.78 | 53.54 |
| CDX72141 | Canola | cytosol | 31.78 | 53.54 |
| KRH54462 | Soybean | cytosol | 50.47 | 52.94 |
| CDX75990 | Canola | cytosol | 31.31 | 52.76 |
| CDY35445 | Canola | cytosol | 38.78 | 51.55 |
| CDY22469 | Canola | cytosol | 37.85 | 51.27 |
| CDY65526 | Canola | cytosol | 37.38 | 50.63 |
| CDY45155 | Canola | nucleus | 49.53 | 46.49 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 36.45 | 46.15 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 54.21 | 44.96 |
| CDY30913 | Canola | nucleus | 49.53 | 44.54 |
| CDY20630 | Canola | nucleus | 50.0 | 43.32 |
| CDY20948 | Canola | nucleus | 50.47 | 42.69 |
| CDX93424 | Canola | nucleus | 49.53 | 41.9 |
| CDY23856 | Canola | nucleus | 42.06 | 41.86 |
| CDY37975 | Canola | nucleus | 49.07 | 41.5 |
| CDX79942 | Canola | nucleus | 41.59 | 41.4 |
| CDY34890 | Canola | nucleus | 50.0 | 41.15 |
| CDY22518 | Canola | nucleus | 41.59 | 41.01 |
| CDY07801 | Canola | nucleus | 50.47 | 40.75 |
| CDY35419 | Canola | nucleus | 41.12 | 40.74 |
| CDY66046 | Canola | nucleus | 48.13 | 40.71 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 41.12 | 39.64 |
| CDY06934 | Canola | cytosol | 40.65 | 39.19 |
| CDX76036 | Canola | nucleus | 39.25 | 37.33 |
| CDX67674 | Canola | cytosol | 40.65 | 37.18 |
| CDX72077 | Canola | cytosol | 40.65 | 37.02 |
| CDY06142 | Canola | cytosol | 40.65 | 36.86 |
| CDY30966 | Canola | cytosol | 38.78 | 35.78 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078HUL1 | UniProt:A0A078HUL1 | EnsemblPlants:CDY41014 | ProteinID:CDY41014 |
| ProteinID:CDY41014.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00072306001 | InterPro:IPR001789 |
| PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 | SMART:SM00448 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | UniParc:UPI0004EE0475 | SEG:seg | : | : | : |
Description
BnaC05g14720DBnaC05g14720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUL1]
Coordinates
chrLK032488:-:23452..25269
Molecular Weight (calculated)
23501.3 Da
IEP (calculated)
5.432
GRAVY (calculated)
-0.280
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGEVMRME IPSGGDMSVT SPELHVLAVD DSIVDRKVIE RLLRISACKV TTVESGARAL QYLGLDGDKG ASGLKDLKVN LIVTDYSMPG LTGYDLLKKI
101: KESSVFREIP VVIMSSENIL PRIEQCLREG AEDFLLKPVK LADVKRIKEL IMRNEAEDCK TLSHSNKRKL AEYIDDAPSP SPSPSSSTHD DSSAKDFPSS
201: KQMKSADEKF SSLL
101: KESSVFREIP VVIMSSENIL PRIEQCLREG AEDFLLKPVK LADVKRIKEL IMRNEAEDCK TLSHSNKRKL AEYIDDAPSP SPSPSSSTHD DSSAKDFPSS
201: KQMKSADEKF SSLL
001: MAVGEVMRME IPAGGDLTVT TPELHVLAVD DSIVDRKVIE RLLRISSCKV TTVESGTRAL QYLGLDGGKG ASNLKDLKVN LIVTDYSMPG LSGYDLLKKI
101: KESSAFREVP VVIMSSENIL PRIQECLKEG AEEFLLKPVK LADVKRIKQL IMRNEAEECK ILSHSNKRKL QEDSDTSSSS HDDTSIKDSS CSKRMKSESE
201: NLFSLL
101: KESSAFREVP VVIMSSENIL PRIQECLKEG AEEFLLKPVK LADVKRIKQL IMRNEAEECK ILSHSNKRKL QEDSDTSSSS HDDTSIKDSS CSKRMKSESE
201: NLFSLL
Arabidopsis Description
ARR7At1g19050 [Source:UniProtKB/TrEMBL;Acc:Q2HIJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.