Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81542 | Canola | nucleus | 88.6 | 86.16 |
| Bra038353.1-P | Field mustard | cytosol | 92.57 | 81.42 |
| AT1G68790.1 | Thale cress | nucleus | 61.82 | 54.47 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 14.02 | 43.65 |
| CDX96106 | Canola | cytosol | 28.56 | 35.09 |
| Os02t0710102-01 | Rice | nucleus | 5.96 | 33.93 |
| CDY12630 | Canola | mitochondrion | 15.59 | 33.86 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 40.17 | 33.65 |
| CDX98000 | Canola | nucleus | 38.18 | 31.28 |
| CDY19387 | Canola | nucleus | 37.03 | 30.89 |
| KRH75531 | Soybean | nucleus | 30.86 | 30.48 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 33.68 | 29.35 |
| KRH70636 | Soybean | nucleus | 36.82 | 29.09 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 27.62 | 27.24 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 6.8 | 27.2 |
| CDY46040 | Canola | cytosol | 30.96 | 27.18 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 31.17 | 24.77 |
| CDY67848 | Canola | nucleus | 19.46 | 24.09 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 28.14 | 23.27 |
| Zm00001d051600_P004 | Maize | nucleus | 28.14 | 23.05 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 27.3 | 22.81 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 27.2 | 22.65 |
| GSMUA_Achr11P... | Banana | nucleus | 30.65 | 22.63 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 26.99 | 22.51 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 20.92 | 19.47 |
| CDY45628 | Canola | nucleus, plastid | 20.4 | 19.44 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 32.01 | 19.16 |
| CDY60978 | Canola | nucleus, plastid | 22.18 | 17.42 |
| CDY08750 | Canola | nucleus | 9.62 | 16.76 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 10.04 | 13.62 |
Protein Annotations
| EnsemblPlants:CDY45853 | EnsemblPlantsGene:GSBRNA2T00082805001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF5 | ProteinID:CDY45853 |
| ProteinID:CDY45853.1 | SEG:seg | SUPFAM:SSF57997 | UniParc:UPI0004EE8A06 | UniProt:A0A078I9N1 | MapMan:20.4.3.1 |
Description
BnaA02g14000DBnaA02g14000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I9N1]
Coordinates
chrLK032638:+:197658..201652
Molecular Weight (calculated)
110406.0 Da
IEP (calculated)
4.971
GRAVY (calculated)
-1.082
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTPQRNQFP ATDRKGKAVA FADEITTPSP PMSRFGSLSA VDDWRRFKEV GLLDEASLER KDLEALIEKN LKLEKELFDY QHNMGLLLIE KKKWTSRNEE
101: LQQAFDEVNE ILKRERTSSL IALSESEKRE ENLRRALISE KQFVAELERD FKYLQQEHTE VKSTSEAKLA EANALVMGIK EKALEVDKER AVAEEKLSVI
201: SRKSSELERK LKDVETREKV LQRERLSLAT EREAHEAVFY KQREDLQEWE KKLTVEEDRL SEVKRSINHT EERSIESERA IKKKEKSLEE MQRKIDTAKS
301: ELKEREESVN KMLNDLSMKE KDFEAMKTKV DMKEKELHEL EEKLVVREQM EIGKLLEDQK GVLDSRMQEF ETELEQRRIS LDEELEKKRG EIEKLQVEIG
401: LKEEQLGKRE AALEKMEERM KEKEKDLEAR LEAVKEKEKA LRTEEKKLHV ENERLLEDKE SLRKLKEEIE EIGAETTKQE SRIREECESL RITKEERLEF
501: IRQQSELKQQ IDRVKQEEWE ALDEKKADIA REQKEVAEEK EKLRSLQISR VLDDVKMKKE SLEGKVTINE NISCTKKLAL KEMEELESEK LALQRERDEI
601: SVEKKQLKKL HDELYKDVAD VDALRISLKE QRDDLYRSKD RFAVLLKKVD LCSTCRIPFH KFINSERVPD LEDGNDRKST SFIGKLASAM APESSLPDDS
701: LDTAAGNDHE PSASFSESKG AEVSLQSEIK SDKPRRGRGR GKSVRGRSQA TSDSKPSDVK LPGKRQREQG SRITESEQAD GDSDEGVDSV TTGGRKKKRQ
801: TAVPVSLAPA QSRYHLRRHR NVGTEEDKAQ ESTGAVEKQE NVNGDIRTVP SPKDSLEENG KAETLVETVT HEEIVKVETE TEFKDKSTGK RPVQEDPQLV
901: AGGSGEGKEH GGEEDDGTFS IIQEENEEED AETEHPGEAS IGKKIWQVKQ KEMCYL
101: LQQAFDEVNE ILKRERTSSL IALSESEKRE ENLRRALISE KQFVAELERD FKYLQQEHTE VKSTSEAKLA EANALVMGIK EKALEVDKER AVAEEKLSVI
201: SRKSSELERK LKDVETREKV LQRERLSLAT EREAHEAVFY KQREDLQEWE KKLTVEEDRL SEVKRSINHT EERSIESERA IKKKEKSLEE MQRKIDTAKS
301: ELKEREESVN KMLNDLSMKE KDFEAMKTKV DMKEKELHEL EEKLVVREQM EIGKLLEDQK GVLDSRMQEF ETELEQRRIS LDEELEKKRG EIEKLQVEIG
401: LKEEQLGKRE AALEKMEERM KEKEKDLEAR LEAVKEKEKA LRTEEKKLHV ENERLLEDKE SLRKLKEEIE EIGAETTKQE SRIREECESL RITKEERLEF
501: IRQQSELKQQ IDRVKQEEWE ALDEKKADIA REQKEVAEEK EKLRSLQISR VLDDVKMKKE SLEGKVTINE NISCTKKLAL KEMEELESEK LALQRERDEI
601: SVEKKQLKKL HDELYKDVAD VDALRISLKE QRDDLYRSKD RFAVLLKKVD LCSTCRIPFH KFINSERVPD LEDGNDRKST SFIGKLASAM APESSLPDDS
701: LDTAAGNDHE PSASFSESKG AEVSLQSEIK SDKPRRGRGR GKSVRGRSQA TSDSKPSDVK LPGKRQREQG SRITESEQAD GDSDEGVDSV TTGGRKKKRQ
801: TAVPVSLAPA QSRYHLRRHR NVGTEEDKAQ ESTGAVEKQE NVNGDIRTVP SPKDSLEENG KAETLVETVT HEEIVKVETE TEFKDKSTGK RPVQEDPQLV
901: AGGSGEGKEH GGEEDDGTFS IIQEENEEED AETEHPGEAS IGKKIWQVKQ KEMCYL
0001: MFTPQRNRWP ETDRKGKAIA FSDEIITPPP QRVLLREDDD WQKFKEVGLL DEASLERKDR DALIEKILKL EKELFDYQHN MGLLLIEKKQ WTSTNNELQQ
0101: AYDEAMEMLK REKTSNAITL NEADKREENL RKALIDEKQF VAELENDLKY WQREHSVVKS TSEAKLEEAN ALVIGMKEKA LEVDRERAIA EEKFSVMNRK
0201: SSELERKLKE VETREKVHQR EHLSLVTERE AHEAVFYKQR EDLQEWEKKL TLEEDRLSEV KRSINHREER VMENERTIEK KEKILENLQQ KISVAKSELT
0301: EKEESIKIKL NDISLKEKDF EAMKAKVDIK EKELHEFEEN LIEREQMEIG KLLDDQKAVL DSRRREFEME LEQMRRSLDE ELEGKKAEIE QLQVEISHKE
0401: EKLAKREAAL EKKEEGVKKK EKDLDARLKT VKEKEKALKA EEKKLHMENE RLLEDKECLR KLKDEIEEIG TETTKQESRI REEHESLRIT KEERVEFLRL
0501: QSELKQQIDK VKQEEELLLK EREELKQDKE RFEKEWEALD KKRANITREQ NEVAEENEKL RNLQISEKHR LKREEMTSRD NLKRELDGVK MQKESFEADM
0601: EDLEMQKRNL DMEFQRQEEA GERDFNERAR TYEKRSQEEL DNINYTKKLA QREMEEMQYE KLALEREREQ ISVRKKLLKE QEAEMHKDIT ELDVLRSSLK
0701: EKRKEFICER ERFLVFLEKL KSCSSCGEIT ENFVLSDLRL PDVEDGDKRF GKQKLKAEEA LNISPSAENS KRTSLLGKIA SKLLSISPIG KTDKVTDLGI
0801: TVKLPESSQP DDSLDRVSGE DHEPSATEQS FTDSRIQEGP EGSLQSEMKS DKPRRGRGRG RGRGKSVRGR SQATKAVSRD SKPSDGETPR KRQREQTSRI
0901: TESEQAAGDS DEGVDSITTG GRRKKRQIAV PVSQTPGQTR YQLRRHRNVG TEEDKAQASK GATEKQERVN DDIRKVPSPK ETRTPPEGEN RENGKAEVLV
1001: ETVTHEEIVT VETETVFKVN NTGKNPVEDP QLEVGGSGEI REHGEEDDEN ISMIEEENEG EEEEETERQG NDASIGKKIW VFFTT
0101: AYDEAMEMLK REKTSNAITL NEADKREENL RKALIDEKQF VAELENDLKY WQREHSVVKS TSEAKLEEAN ALVIGMKEKA LEVDRERAIA EEKFSVMNRK
0201: SSELERKLKE VETREKVHQR EHLSLVTERE AHEAVFYKQR EDLQEWEKKL TLEEDRLSEV KRSINHREER VMENERTIEK KEKILENLQQ KISVAKSELT
0301: EKEESIKIKL NDISLKEKDF EAMKAKVDIK EKELHEFEEN LIEREQMEIG KLLDDQKAVL DSRRREFEME LEQMRRSLDE ELEGKKAEIE QLQVEISHKE
0401: EKLAKREAAL EKKEEGVKKK EKDLDARLKT VKEKEKALKA EEKKLHMENE RLLEDKECLR KLKDEIEEIG TETTKQESRI REEHESLRIT KEERVEFLRL
0501: QSELKQQIDK VKQEEELLLK EREELKQDKE RFEKEWEALD KKRANITREQ NEVAEENEKL RNLQISEKHR LKREEMTSRD NLKRELDGVK MQKESFEADM
0601: EDLEMQKRNL DMEFQRQEEA GERDFNERAR TYEKRSQEEL DNINYTKKLA QREMEEMQYE KLALEREREQ ISVRKKLLKE QEAEMHKDIT ELDVLRSSLK
0701: EKRKEFICER ERFLVFLEKL KSCSSCGEIT ENFVLSDLRL PDVEDGDKRF GKQKLKAEEA LNISPSAENS KRTSLLGKIA SKLLSISPIG KTDKVTDLGI
0801: TVKLPESSQP DDSLDRVSGE DHEPSATEQS FTDSRIQEGP EGSLQSEMKS DKPRRGRGRG RGRGKSVRGR SQATKAVSRD SKPSDGETPR KRQREQTSRI
0901: TESEQAAGDS DEGVDSITTG GRRKKRQIAV PVSQTPGQTR YQLRRHRNVG TEEDKAQASK GATEKQERVN DDIRKVPSPK ETRTPPEGEN RENGKAEVLV
1001: ETVTHEEIVT VETETVFKVN NTGKNPVEDP QLEVGGSGEI REHGEEDDEN ISMIEEENEG EEEEETERQG NDASIGKKIW VFFTT
Arabidopsis Description
CRWN3Protein CROWDED NUCLEI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA42]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.