Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 50.78 | 34.86 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 24.96 | 14.63 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 22.84 | 14.11 |
| KRH75531 | Soybean | nucleus | 19.01 | 13.84 |
| PGSC0003DMT400008676 | Potato | cytosol | 20.28 | 13.07 |
| GSMUA_Achr11P... | Banana | nucleus | 23.4 | 12.74 |
| CDX96106 | Canola | cytosol | 14.04 | 12.72 |
| CDY67848 | Canola | nucleus | 13.9 | 12.69 |
| Solyc02g089800.2.1 | Tomato | nucleus | 19.43 | 12.62 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 20.14 | 12.49 |
| Solyc03g045050.2.1 | Tomato | nucleus | 20.43 | 12.34 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 16.88 | 12.28 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 21.7 | 12.15 |
| KRH70636 | Soybean | nucleus | 20.71 | 12.07 |
| KRH01492 | Soybean | nucleus | 19.57 | 11.59 |
| CDY46040 | Canola | cytosol | 17.73 | 11.48 |
| Bra034012.1-P | Field mustard | cytosol | 17.87 | 11.3 |
| KRH45183 | Soybean | nucleus | 19.01 | 11.25 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 17.45 | 11.21 |
| AT1G67230.1 | Thale cress | nucleus | 17.87 | 11.13 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 25.11 | 11.08 |
| CDX98000 | Canola | nucleus | 18.3 | 11.05 |
| CDY19387 | Canola | nucleus | 17.87 | 10.99 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 16.45 | 10.87 |
| AT1G68790.1 | Thale cress | nucleus | 16.6 | 10.78 |
| AT1G13220.3 | Thale cress | nucleus | 17.16 | 10.6 |
| CDX81542 | Canola | nucleus | 14.04 | 10.07 |
| CDY45853 | Canola | cytosol | 13.62 | 10.04 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 15.32 | 9.45 |
| Bra038353.1-P | Field mustard | cytosol | 13.19 | 8.56 |
| CDY12630 | Canola | mitochondrion | 4.54 | 7.27 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 2.7 | 6.19 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 1.13 | 3.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P21830_001 | EnsemblPlants:GSMUA_Achr9T21830_001 | EnsemblPlantsGene:GSMUA_Achr9G21830_001 | ncoils:Coil | PANTHER:PTHR31908 | SEG:seg |
| UniParc:UPI00029580B5 | UniProt:M0U2E2 | MapMan:35.2 | : | : | : |
Description
nuclear matrix constituent protein 1-like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G21830_001]
Coordinates
chr9:+:26963218..26966848
Molecular Weight (calculated)
81742.9 Da
IEP (calculated)
4.442
GRAVY (calculated)
-1.046
Length
705 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHERCNTL KKKEKELEES WKTLEVFNDS IKLKEEDMFM RLRDLDAKEK EAVIKQELLE KKEKELLAIE DPLSNRESVD IQKIIDDNDS ILESKKEEFE
101: LETEMNRRAV DEQLKRRMDV VAHKEIILEN RNKNIFKREQ LLEREMRNLK NRETKDDMML NDLKESIENE NELRQERSKL EKERELFGER RLPLVEDLDQ
201: LYDEREGFGQ WKHTEEERLR MENLEVLGHV QMDLVDSRLN EEALKDKTAY QNKDDIELFI GENAHIAHEV DVYTMERNQE KVKETLHEKE NDPNRRSNIV
301: LNNCNTWSSP DESKILKLKE PADLLQGEKK FFLGKKNEAG QITPRISQDN NDQVEEPATK GDYLLPPDEQ LKACRNCGVE DGGESILSRE NAEESDLEAH
401: TSRMQRCSRL LNFSPDRMTT ERSDKSVCLH GEPLGHEDNL EPGPLPGDVD VFQWAQSTSG VQYSAIPERL NKDSDATKSF LEIADSSADI MKSYDNQKYM
501: EKPPFPFADE QKDREGCSVF PELDSVPQPS RQKQCDPDVR RSVFAENSCS VNALIDDANL GETPQSKHNE KSIYKEKGLF EDDSLEEGSF SDDQVELSDE
601: EWYLSDEHET TSIELEEESA EAHSEDVSSL GCCSKMENSP ETEIPGLKRY NFRLTTIARA VACRTKRKKR EELEVTLECK VLKVFEHDGE EAQSHACDSE
701: SLSQK
101: LETEMNRRAV DEQLKRRMDV VAHKEIILEN RNKNIFKREQ LLEREMRNLK NRETKDDMML NDLKESIENE NELRQERSKL EKERELFGER RLPLVEDLDQ
201: LYDEREGFGQ WKHTEEERLR MENLEVLGHV QMDLVDSRLN EEALKDKTAY QNKDDIELFI GENAHIAHEV DVYTMERNQE KVKETLHEKE NDPNRRSNIV
301: LNNCNTWSSP DESKILKLKE PADLLQGEKK FFLGKKNEAG QITPRISQDN NDQVEEPATK GDYLLPPDEQ LKACRNCGVE DGGESILSRE NAEESDLEAH
401: TSRMQRCSRL LNFSPDRMTT ERSDKSVCLH GEPLGHEDNL EPGPLPGDVD VFQWAQSTSG VQYSAIPERL NKDSDATKSF LEIADSSADI MKSYDNQKYM
501: EKPPFPFADE QKDREGCSVF PELDSVPQPS RQKQCDPDVR RSVFAENSCS VNALIDDANL GETPQSKHNE KSIYKEKGLF EDDSLEEGSF SDDQVELSDE
601: EWYLSDEHET TSIELEEESA EAHSEDVSSL GCCSKMENSP ETEIPGLKRY NFRLTTIARA VACRTKRKKR EELEVTLECK VLKVFEHDGE EAQSHACDSE
701: SLSQK
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.