Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 21.38 | 78.83 |
| CDX96106 | Canola | cytosol | 53.62 | 78.02 |
| Bra034012.1-P | Field mustard | cytosol | 69.96 | 71.03 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 66.34 | 70.38 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 59.63 | 69.66 |
| CDY46040 | Canola | cytosol | 66.96 | 69.61 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 67.05 | 69.19 |
| CDY67848 | Canola | nucleus | 44.96 | 65.93 |
| CDY12630 | Canola | mitochondrion | 23.14 | 59.55 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 49.12 | 44.16 |
| Solyc02g089800.2.1 | Tomato | nucleus | 41.87 | 43.65 |
| KRH01492 | Soybean | nucleus | 44.61 | 42.4 |
| Os02t0710102-01 | Rice | nucleus | 6.27 | 42.26 |
| KRH45183 | Soybean | nucleus | 44.43 | 42.23 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 42.31 | 42.13 |
| PGSC0003DMT400008676 | Potato | cytosol | 40.28 | 41.68 |
| Solyc03g045050.2.1 | Tomato | nucleus | 41.96 | 40.7 |
| AT1G68790.1 | Thale cress | nucleus | 32.95 | 34.38 |
| AT1G13220.3 | Thale cress | nucleus | 33.48 | 33.22 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 6.71 | 31.8 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 32.86 | 30.92 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 30.48 | 29.84 |
| Zm00001d051600_P004 | Maize | nucleus | 30.3 | 29.39 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 29.68 | 29.27 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 29.42 | 29.11 |
| GSMUA_Achr11P... | Banana | nucleus | 33.13 | 28.96 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 29.15 | 28.8 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 21.73 | 23.95 |
| AT5G65780.2 | Thale cress | plastid | 21.38 | 23.77 |
| AT5G65770.2 | Thale cress | plastid | 21.2 | 23.03 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 31.54 | 22.35 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 11.13 | 17.87 |
Protein Annotations
| MapMan:20.4.3.1 | EntrezGene:843043 | ProteinID:AAG00257.1 | ProteinID:AEE34615.1 | EMBL:AK117144 | EMBL:AK230454 |
| ArrayExpress:AT1G67230 | EnsemblPlantsGene:AT1G67230 | RefSeq:AT1G67230 | TAIR:AT1G67230 | RefSeq:AT1G67230-TAIR-G | EnsemblPlants:AT1G67230.1 |
| TAIR:AT1G67230.1 | Unigene:At.43084 | ncoils:Coil | UniProt:F4HRT5 | GO:GO:0000789 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005652 | GO:GO:0005654 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006997 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0031965 | GO:GO:0034399 |
| GO:GO:0097298 | Symbol:LINC1 | RefSeq:NP_176892.1 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31908 |
| PANTHER:PTHR31908:SF3 | UniParc:UPI000016324D | SEG:seg | : | : | : |
Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
Coordinates
chr1:-:25151211..25156389
Molecular Weight (calculated)
129100.0 Da
IEP (calculated)
4.961
GRAVY (calculated)
-1.053
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.