Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P21830_001 | Banana | nucleus | 34.86 | 50.78 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 11.68 | 50.21 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.46 | 41.69 |
| CDY12630 | Canola | mitochondrion | 12.46 | 29.09 |
| CDX96106 | Canola | cytosol | 22.01 | 29.05 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 32.52 | 27.76 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 29.6 | 26.64 |
| GSMUA_Achr11P... | Banana | nucleus | 32.42 | 25.71 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 24.63 | 23.71 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 25.32 | 23.7 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 22.01 | 23.32 |
| KRH75531 | Soybean | nucleus | 21.71 | 23.04 |
| Bra034012.1-P | Field mustard | cytosol | 24.83 | 22.87 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 27.95 | 22.8 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 25.22 | 22.78 |
| CDY46040 | Canola | cytosol | 23.76 | 22.41 |
| Solyc03g045050.2.1 | Tomato | nucleus | 25.41 | 22.36 |
| KRH45183 | Soybean | nucleus | 25.9 | 22.33 |
| KRH01492 | Soybean | nucleus | 25.9 | 22.33 |
| Solyc02g089800.2.1 | Tomato | nucleus | 23.37 | 22.1 |
| PGSC0003DMT400008676 | Potato | cytosol | 23.27 | 21.85 |
| CDY19387 | Canola | nucleus | 24.34 | 21.82 |
| AT1G67230.1 | Thale cress | nucleus | 23.95 | 21.73 |
| AT1G13220.3 | Thale cress | nucleus | 23.76 | 21.38 |
| CDX81542 | Canola | nucleus | 20.35 | 21.26 |
| CDX98000 | Canola | nucleus | 24.05 | 21.17 |
| KRH70636 | Soybean | nucleus | 24.93 | 21.16 |
| CDY45853 | Canola | cytosol | 19.47 | 20.92 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 31.74 | 20.41 |
| AT1G68790.1 | Thale cress | nucleus | 20.74 | 19.63 |
| Bra038353.1-P | Field mustard | cytosol | 19.67 | 18.58 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 19.57 | 17.59 |
| CDY67848 | Canola | nucleus | 12.56 | 16.71 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P28980_001 | EnsemblPlants:GSMUA_Achr3T28980_001 | EnsemblPlantsGene:GSMUA_Achr3G28980_001 | ncoils:Coil | PANTHER:PTHR31908 | SEG:seg |
| UniParc:UPI00029531EB | UniProt:M0SIR4 | MapMan:20.4.3.1 | : | : | : |
Description
nuclear matrix constituent protein 1-like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G28980_001]
Coordinates
chr3:-:28318779..28331001
Molecular Weight (calculated)
117835.0 Da
IEP (calculated)
5.220
GRAVY (calculated)
-0.898
Length
1027 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLAPQKKGLF LSPRAVAARR NGPAQSSFGN WGGVVPGTRK GREVVAGNAI PQPEELPLCG DGEDREKEQS EAQVWRRFRE AGFLDEAVLQ RRDREALVRR
0101: ISELEKELYQ YQYHMGLLLI EKKEWAVKYD KLRQEMSEAA QLQKCMQAAH IVAVAEFEKS EGNLRRAMGF QRQSIIHLEK ALNDMHAEIA EVKLDSQKKL
0201: SEAHTLEATI EEKCLEIKEK QHSLDARLAK VSRKSSEVDR RLEDVEAREH ELFKQTSSFI AEKKAFEKDL SRQRENLRAW EQQLQDNQKK LGKWHSTENQ
0301: REMETNERDN TFRKKEKELE EARKTLEISN ELIKLKEEDM CMRIGALDAK EKEALLKQEF LEKKENELLA IEEQLNNKER VEIQKITDFH NSILESQKDE
0401: FELETEKKKR AVDEQLQGRI EEVAHKEIIL ENRERELFKK EQLLEREIGN LKNREKENDI MLSAVKVSIE NEKEEMRQGR GKLEKEWELL GERRLSLEEG
0501: LKQLFDEKER FDQWRCTEEE RLRKENPEVS IHAQMDLEDS ISDEEAFKDK TTHQKMDVLE VFNSENAHVV YEIMQRIPEK VKETLLEKED NSNRRSNIVL
0601: NNCKILSSLD ESNILKLKEQ EDQLKSEKQL LVLGKKSEAG QSTSGTLSRN NKDQVVEPAE EGDYLPASAE QLKACRYCGF EDGGDTALSG GSVEVSDQGT
0701: CPGSVKLEAR IPCMQRCSRL LNFSPGKKAT EHSEKSVCLD GEPLEHEDNL EPGPLPGDVN AFQWAQSAGG VQYNAEPERS NNDDDATKRD SQIADRSADI
0801: LIFELNDRVR DLEEPTLHSV DEQKYREGCS IRPELNSLLW PLKQKQSGRS VRRKSILVKK SRSVNALVED ANLEEASQIK HSEQSTCRAQ CLIKDKCLEE
0901: KYSLNDDEVT VCSKKRCLDL KYGMMSLEGE CAEAHTEDVS SLGCCFQMEN IPGTEIPGLK RYNLRHSTIV RAVAASQALA CRTKQKRKGE LELSLENKVL
1001: KVARRDGEGA ESHASASETL RSDIRNS
0101: ISELEKELYQ YQYHMGLLLI EKKEWAVKYD KLRQEMSEAA QLQKCMQAAH IVAVAEFEKS EGNLRRAMGF QRQSIIHLEK ALNDMHAEIA EVKLDSQKKL
0201: SEAHTLEATI EEKCLEIKEK QHSLDARLAK VSRKSSEVDR RLEDVEAREH ELFKQTSSFI AEKKAFEKDL SRQRENLRAW EQQLQDNQKK LGKWHSTENQ
0301: REMETNERDN TFRKKEKELE EARKTLEISN ELIKLKEEDM CMRIGALDAK EKEALLKQEF LEKKENELLA IEEQLNNKER VEIQKITDFH NSILESQKDE
0401: FELETEKKKR AVDEQLQGRI EEVAHKEIIL ENRERELFKK EQLLEREIGN LKNREKENDI MLSAVKVSIE NEKEEMRQGR GKLEKEWELL GERRLSLEEG
0501: LKQLFDEKER FDQWRCTEEE RLRKENPEVS IHAQMDLEDS ISDEEAFKDK TTHQKMDVLE VFNSENAHVV YEIMQRIPEK VKETLLEKED NSNRRSNIVL
0601: NNCKILSSLD ESNILKLKEQ EDQLKSEKQL LVLGKKSEAG QSTSGTLSRN NKDQVVEPAE EGDYLPASAE QLKACRYCGF EDGGDTALSG GSVEVSDQGT
0701: CPGSVKLEAR IPCMQRCSRL LNFSPGKKAT EHSEKSVCLD GEPLEHEDNL EPGPLPGDVN AFQWAQSAGG VQYNAEPERS NNDDDATKRD SQIADRSADI
0801: LIFELNDRVR DLEEPTLHSV DEQKYREGCS IRPELNSLLW PLKQKQSGRS VRRKSILVKK SRSVNALVED ANLEEASQIK HSEQSTCRAQ CLIKDKCLEE
0901: KYSLNDDEVT VCSKKRCLDL KYGMMSLEGE CAEAHTEDVS SLGCCFQMEN IPGTEIPGLK RYNLRHSTIV RAVAASQALA CRTKQKRKGE LELSLENKVL
1001: KVARRDGEGA ESHASASETL RSDIRNS
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.