Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 72.45 | 81.42 |
| CDX96106 | Canola | cytosol | 55.1 | 77.12 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 21.4 | 75.9 |
| CDY12630 | Canola | mitochondrion | 28.1 | 69.55 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 69.33 | 68.82 |
| AT1G67230.1 | Thale cress | nucleus | 69.61 | 66.96 |
| CDY67848 | Canola | nucleus | 47.11 | 66.45 |
| Os02t0710102-01 | Rice | nucleus | 6.89 | 44.64 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 47.84 | 41.38 |
| KRH45183 | Soybean | nucleus | 43.99 | 40.22 |
| Solyc02g089800.2.1 | Tomato | nucleus | 39.85 | 39.96 |
| KRH01492 | Soybean | nucleus | 43.25 | 39.55 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 41.23 | 39.49 |
| PGSC0003DMT400008676 | Potato | cytosol | 39.12 | 38.94 |
| Solyc03g045050.2.1 | Tomato | nucleus | 40.31 | 37.62 |
| CDY19387 | Canola | nucleus | 33.52 | 31.85 |
| CDX81542 | Canola | nucleus | 28.65 | 31.74 |
| CDX98000 | Canola | nucleus | 33.88 | 31.62 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 6.89 | 31.38 |
| CDY45853 | Canola | cytosol | 27.18 | 30.96 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 33.79 | 30.59 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 32.05 | 30.19 |
| Zm00001d051600_P004 | Maize | nucleus | 32.23 | 30.08 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 30.76 | 29.18 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 30.49 | 29.02 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 29.84 | 28.36 |
| GSMUA_Achr11P... | Banana | nucleus | 33.06 | 27.8 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 22.41 | 23.76 |
| CDY45628 | Canola | nucleus, plastid | 20.84 | 22.63 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 32.05 | 21.85 |
| CDY60978 | Canola | nucleus, plastid | 21.95 | 19.64 |
| CDY08750 | Canola | nucleus | 9.27 | 18.4 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 11.48 | 17.73 |
Protein Annotations
| EnsemblPlants:CDY46040 | EnsemblPlantsGene:GSBRNA2T00083168001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 | ProteinID:CDY46040 |
| ProteinID:CDY46040.1 | SEG:seg | UniParc:UPI0004EF442F | UniProt:A0A078I5E7 | MapMan:20.4.3.1 | : |
Description
BnaC02g17300DBnaC02g17300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5E7]
Coordinates
chrLK032647:-:141390..146203
Molecular Weight (calculated)
124728.0 Da
IEP (calculated)
4.866
GRAVY (calculated)
-1.085
Length
1089 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSTPAKATN QDSNGKGPDM VTPVTGRVSE IQYEDDPRRL LSALQKELFE YQHSMGLLLL EKKEWSSKYE ELQLEFEDAN ECLRRERNAH LVAMSDVEKR
0101: EEGLKKALGV EKQCALDLEK ALRELRSENA EIKFTADSKL TEADALVRSV EEKSLEVEAK LRAVDARLAE ASRKSSEVER KSKEVEARES SLQRERFAYI
0201: AEREADEATL SKQREDLREW EKKLQEGEER VAKSQMIVKQ REDRANESDK IVMQKGKELE EAQKKIDAAN LALKKKEDDI TSRIKALTLR EQETDRKGKR
0301: SLSLSYTHTQ THSISLYIEV EVQQLIDEHQ TKLEATQREF ELEMEQKRKS IDDSLRSKVV EVEKREAEWK HMEEKVAKRE QALDRKLEKH KEKEKDFEAR
0401: LKGIKGREIA LRSEEKALET EKKKLAEDKE NILNLIAEVE KIKAENEVQL SEIREEKEGL RVTEEERSEY LRLQTELKEQ IEKCRSQQEL LAKEAVDLKA
0501: QRECFEKGWE ELDERKAEIE SELKNITDEK AKLERNNHLE EERLEKEHQA ADDNMKRELE TLEVAKASFA DTMEHERSAI YKKAESERSQ LLHDIEMLKR
0601: KVESDMQSKL EEREKELQAK EKLFEEEREK ELSNINYLRD LARREMMDVQ IDRQRMEIEK LETDASKKHL EEQQTEIRKD VDDLVALTKK LKEQREQFIS
0701: ERNRFLSSME SNRNCNHCSE LLSELALPDI DNLEMPNLSK LENILENEAP QQEMRDISPT ASSLGLPVPN GTVSWLRKCT SKILKLSPIK MGETSATLNF
0801: ADQEPESTEQ ANVNSGPSTM LQVQSESETK EVEVANANSD GDQSNINRKA QEVDADSLSN PNGDGQSRMR GKARVRRTRS VKAVVEDAKA IYGESIELSD
0901: PVDSIENVED AAKGKDESTS EPGRSDKGAS KNGRKRGRMG SLRTCTTEQD GNESDGKSDS VTGGERQRGK RRQKVASEQQ QEVVGQRYNL RRSTRVAGKT
1001: SLASVGVALS DNGVSTNVVE REAMADFEDT HAGSPKRIGE SGEMSEEDVN KTPQRADSGN EYDGEEDESE SEHPGKVSIS KKLWTFLTT
0101: EEGLKKALGV EKQCALDLEK ALRELRSENA EIKFTADSKL TEADALVRSV EEKSLEVEAK LRAVDARLAE ASRKSSEVER KSKEVEARES SLQRERFAYI
0201: AEREADEATL SKQREDLREW EKKLQEGEER VAKSQMIVKQ REDRANESDK IVMQKGKELE EAQKKIDAAN LALKKKEDDI TSRIKALTLR EQETDRKGKR
0301: SLSLSYTHTQ THSISLYIEV EVQQLIDEHQ TKLEATQREF ELEMEQKRKS IDDSLRSKVV EVEKREAEWK HMEEKVAKRE QALDRKLEKH KEKEKDFEAR
0401: LKGIKGREIA LRSEEKALET EKKKLAEDKE NILNLIAEVE KIKAENEVQL SEIREEKEGL RVTEEERSEY LRLQTELKEQ IEKCRSQQEL LAKEAVDLKA
0501: QRECFEKGWE ELDERKAEIE SELKNITDEK AKLERNNHLE EERLEKEHQA ADDNMKRELE TLEVAKASFA DTMEHERSAI YKKAESERSQ LLHDIEMLKR
0601: KVESDMQSKL EEREKELQAK EKLFEEEREK ELSNINYLRD LARREMMDVQ IDRQRMEIEK LETDASKKHL EEQQTEIRKD VDDLVALTKK LKEQREQFIS
0701: ERNRFLSSME SNRNCNHCSE LLSELALPDI DNLEMPNLSK LENILENEAP QQEMRDISPT ASSLGLPVPN GTVSWLRKCT SKILKLSPIK MGETSATLNF
0801: ADQEPESTEQ ANVNSGPSTM LQVQSESETK EVEVANANSD GDQSNINRKA QEVDADSLSN PNGDGQSRMR GKARVRRTRS VKAVVEDAKA IYGESIELSD
0901: PVDSIENVED AAKGKDESTS EPGRSDKGAS KNGRKRGRMG SLRTCTTEQD GNESDGKSDS VTGGERQRGK RRQKVASEQQ QEVVGQRYNL RRSTRVAGKT
1001: SLASVGVALS DNGVSTNVVE REAMADFEDT HAGSPKRIGE SGEMSEEDVN KTPQRADSGN EYDGEEDESE SEHPGKVSIS KKLWTFLTT
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.