Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008676 | Potato | cytosol | 85.26 | 90.95 |
| Solyc02g089800.2.1 | Tomato | nucleus | 56.13 | 60.31 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 14.22 | 54.07 |
| CDX96106 | Canola | cytosol | 33.5 | 50.26 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 48.41 | 44.88 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 39.85 | 43.58 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 40.53 | 43.12 |
| KRH01492 | Soybean | nucleus | 43.53 | 42.65 |
| KRH45183 | Soybean | nucleus | 43.53 | 42.65 |
| AT1G67230.1 | Thale cress | nucleus | 40.7 | 41.96 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 34.7 | 41.8 |
| Bra034012.1-P | Field mustard | cytosol | 39.76 | 41.61 |
| Os02t0710102-01 | Rice | nucleus | 5.91 | 41.07 |
| CDY12630 | Canola | mitochondrion | 15.25 | 40.45 |
| CDY46040 | Canola | cytosol | 37.62 | 40.31 |
| CDY67848 | Canola | nucleus | 25.28 | 38.21 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 7.11 | 34.73 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 34.53 | 33.5 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 30.68 | 31.18 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 30.76 | 31.06 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 30.25 | 30.86 |
| Zm00001d051600_P004 | Maize | nucleus | 30.76 | 30.76 |
| GSMUA_Achr11P... | Banana | nucleus | 33.93 | 30.58 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 29.73 | 30.28 |
| Solyc02g091960.2.1 | Tomato | nucleus | 12.0 | 28.81 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 22.36 | 25.41 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 33.42 | 24.42 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 12.34 | 20.43 |
Protein Annotations
| EnsemblPlants:Solyc03g045050.2.1 | EnsemblPlantsGene:Solyc03g045050.2 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 | SEG:seg |
| UniParc:UPI000276855D | UniProt:K4BGB7 | MapMan:20.4.3.1 | : | : | : |
Description
No Description!
Coordinates
chr3:+:11416204..11425752
Molecular Weight (calculated)
134229.0 Da
IEP (calculated)
4.901
GRAVY (calculated)
-1.082
Length
1167 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTPPRKVFS GWTLTPRTDL ANKTVSKGKD VVFMGSGQKV LSSIQDYDTV DKVVLLDKVS KLENELVDYQ YNMGLLLIEK KEWSAKLEEI KQALSEANEA
0101: YRREHTAHLI ALSEVEKREE NLRKALGVEN QCVRELEKEL REMRSQYAET KYVADSKLDE AKALATSVEE NSLHVELKLR AADAKTAEVS RKSSDVERKM
0201: RDIEAQENAL RRERSSFNTE REAHESAISK HREELREWER KLKEGEERLA DARTLLNQRE QRANENDGIL RQKQSDLEDE QRKIDIANSV LRKKEVDMSS
0301: RLAILASKEK ELEDVRKSLE IKKEELDELQ EKLNAKEREE IQKLMDEHRA ILKSKEEEFE LEMRQRHASL DEELENKVIE LEKKEAEVGH IEEKLKKREQ
0401: ALEKKSDKMK EKEKDLELKL KALKEREKSL KIDERELETE KKQIFTEKDR LLDLRVELEN RRAELEKQQL KINEGIEQLK ITEDEKMEHA RLQSELKQEI
0501: DKCRDLRDTL LNEAEDLKQE KERFEREWEE LDEKRSAIKK ELQEVNDSKK KFEKLQHTEE ERLKKEKLET ENYVQRELEA LKVAQETFAA TMDHERSVLS
0601: EKTQSEKIRM LHDFEKQKRD LESEMQRKRE EMESALHEQK KRFEEERQRE LSNANYLREV AHKEMEVMKS ERVRLEHEKQ EISSNKMHLV EQQSEMKKDI
0701: DVLDGLSRKL KDQREAFAKE RERFLAFVKK QENCSSCGEG IRIFELSDLQ PLNDVVDLEA PSLRNVAQEY LTDGFQDTPV RANNELLPGA LNSGSMASAG
0801: TMSWLRKCTT KLLKFSPGKK IEHPASQDLI GGSSPEEKFE GELPDTMVKK DQVDLAISIK DTFDDQKLQT DNSVREVEVG KDVPEDSQHS NRNSQRRPVR
0901: KGRGKNSKTG HTNSKATSAK IILGENVKES ENILVNGGFE TSINVNESQK EDSSLFGEAP SKTRKRTRIH GTASEFDGSH SDGQSDSVTT TSRRKRRQKA
1001: APSVQAPGEK RYNLRHPRSA AVATANGSLP ELVSKSQEEN GDSKVVPETP AAISDGELRN SDAALPAVAD SPLIEAADDQ ACAGDIANEL VDDTGLSEEI
1101: NGTPEGPSAY NVYDEEHEGD TIVQEEDGER DEDADENDEL DEGNEEEEVP HPGEVSIGKK IWSFITT
0101: YRREHTAHLI ALSEVEKREE NLRKALGVEN QCVRELEKEL REMRSQYAET KYVADSKLDE AKALATSVEE NSLHVELKLR AADAKTAEVS RKSSDVERKM
0201: RDIEAQENAL RRERSSFNTE REAHESAISK HREELREWER KLKEGEERLA DARTLLNQRE QRANENDGIL RQKQSDLEDE QRKIDIANSV LRKKEVDMSS
0301: RLAILASKEK ELEDVRKSLE IKKEELDELQ EKLNAKEREE IQKLMDEHRA ILKSKEEEFE LEMRQRHASL DEELENKVIE LEKKEAEVGH IEEKLKKREQ
0401: ALEKKSDKMK EKEKDLELKL KALKEREKSL KIDERELETE KKQIFTEKDR LLDLRVELEN RRAELEKQQL KINEGIEQLK ITEDEKMEHA RLQSELKQEI
0501: DKCRDLRDTL LNEAEDLKQE KERFEREWEE LDEKRSAIKK ELQEVNDSKK KFEKLQHTEE ERLKKEKLET ENYVQRELEA LKVAQETFAA TMDHERSVLS
0601: EKTQSEKIRM LHDFEKQKRD LESEMQRKRE EMESALHEQK KRFEEERQRE LSNANYLREV AHKEMEVMKS ERVRLEHEKQ EISSNKMHLV EQQSEMKKDI
0701: DVLDGLSRKL KDQREAFAKE RERFLAFVKK QENCSSCGEG IRIFELSDLQ PLNDVVDLEA PSLRNVAQEY LTDGFQDTPV RANNELLPGA LNSGSMASAG
0801: TMSWLRKCTT KLLKFSPGKK IEHPASQDLI GGSSPEEKFE GELPDTMVKK DQVDLAISIK DTFDDQKLQT DNSVREVEVG KDVPEDSQHS NRNSQRRPVR
0901: KGRGKNSKTG HTNSKATSAK IILGENVKES ENILVNGGFE TSINVNESQK EDSSLFGEAP SKTRKRTRIH GTASEFDGSH SDGQSDSVTT TSRRKRRQKA
1001: APSVQAPGEK RYNLRHPRSA AVATANGSLP ELVSKSQEEN GDSKVVPETP AAISDGELRN SDAALPAVAD SPLIEAADDQ ACAGDIANEL VDDTGLSEEI
1101: NGTPEGPSAY NVYDEEHEGD TIVQEEDGER DEDADENDEL DEGNEEEEVP HPGEVSIGKK IWSFITT
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.