Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14400_001 | Banana | cytosol | 59.0 | 63.51 |
| Os02t0710102-01 | Rice | nucleus | 6.95 | 53.57 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.12 | 46.91 |
| CDX96106 | Canola | cytosol | 24.56 | 40.87 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 34.98 | 39.19 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 34.67 | 39.11 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 34.44 | 38.99 |
| Zm00001d051600_P004 | Maize | nucleus | 34.98 | 38.82 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 34.13 | 38.57 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 33.28 | 37.77 |
| CDY12630 | Canola | mitochondrion | 12.36 | 36.36 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 29.88 | 35.28 |
| KRH45183 | Soybean | nucleus | 32.36 | 35.18 |
| KRH01492 | Soybean | nucleus | 32.28 | 35.1 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 34.05 | 35.03 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 26.1 | 34.88 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 43.01 | 34.88 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 6.41 | 34.73 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 28.42 | 34.49 |
| PGSC0003DMT400008676 | Potato | cytosol | 29.03 | 34.37 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 30.12 | 34.3 |
| Bra034012.1-P | Field mustard | cytosol | 29.42 | 34.17 |
| Solyc02g089800.2.1 | Tomato | nucleus | 28.57 | 34.07 |
| Solyc03g045050.2.1 | Tomato | nucleus | 30.58 | 33.93 |
| KRH75531 | Soybean | nucleus | 25.17 | 33.68 |
| AT1G67230.1 | Thale cress | nucleus | 28.96 | 33.13 |
| CDY46040 | Canola | cytosol | 27.8 | 33.06 |
| CDX98000 | Canola | nucleus | 29.34 | 32.56 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 25.71 | 32.42 |
| CDY19387 | Canola | nucleus | 28.65 | 32.37 |
| KRH70636 | Soybean | nucleus | 30.04 | 32.15 |
| AT1G13220.3 | Thale cress | nucleus | 28.19 | 31.99 |
| AT1G68790.1 | Thale cress | nucleus | 26.18 | 31.24 |
| CDX81542 | Canola | nucleus | 23.55 | 31.03 |
| CDY45853 | Canola | cytosol | 22.63 | 30.65 |
| CDY67848 | Canola | nucleus | 17.84 | 29.92 |
| Bra038353.1-P | Field mustard | cytosol | 23.17 | 27.6 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 21.16 | 23.97 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 12.74 | 23.4 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P13580_001 | EnsemblPlants:GSMUA_Achr11T13580_001 | EnsemblPlantsGene:GSMUA_Achr11G13580_001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 |
| SEG:seg | UniParc:UPI000296E2FB | UniProt:M0RRY8 | MapMan:20.4.3.1 | : | : |
Description
nuclear matrix constituent protein 1-like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G13580_001]
Coordinates
chr11:-:14560436..14569960
Molecular Weight (calculated)
148550.0 Da
IEP (calculated)
5.034
GRAVY (calculated)
-0.960
Length
1295 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVLIKGDRFE SNRTGASFPT TRRPDRRKIA CIKGDGVDKR YWIVGSPIWD REALPFVLVF VLKFLDEELG FLMFTPQRKG WSPSPRYGDG VDNRMTTPAV
0101: NTRTGSGVAF LKGKGKSAVE ALPPPPPLQA LLGENGSIGV VDQGDAEVWR SFREAGLLDE SSLQRKDRDA LVQRISELEK ELHEYQYNMG LLLIEKKDWA
0201: SKYEEIRQAL AEVDETLKKE KSACLASISE FAKREENLQK ALGVEQQCVS DLEKALREMR SELAEVKFTS DKKLDDAHAL EIGLEEKYLE VEQKLHAADA
0301: KLAEASRKSS DVDRKLEDVE AREHKLQKEY LLFDSGRKLH EKDITEQREH LRDWEQKLQD SQKRLVETQR YLNEREDRTN EADRVLKKKE ADAEEARKMI
0401: EATKKSLKTK EEEITKRLGS LAAKEKEVDV KVESLENKEK DLISREEKLN ARERVEIQKL LDDHNLLISS KKEEFELDLE KRRKSLSKEI ECKIREVEKK
0501: RREIDSMEEQ ITKREQALQM NLQKLMDKEK DVDLKSNDLK KWEESVQNDE KKLEKERQQL ASDSEEFLKS KSDLESLKAA IESRKEQIMK EEENLRLTKG
0601: EREEHLLLQS NLKQESEDCR ILKESLLRDT EDLQQQREKF EEEWEVLDEK RLALEAERKK FNDEREKFEK WRHDEEERLN NEALVARANF ERELEELNQK
0701: TEAFGEIMEH ERLEALEVLK RERADMAREL ELCKHELEMD MQKRQEDTEK KLLDKENDFQ RKRDLDFNQM ISLSSSNDLK IQKLKMEEDR LEREKEDLSS
0801: YRKRLEIDRL EIQKDIDALR MLSRNLKEQR EEFMKEKERF LAQAEQKTCK NCGLLVGDLD TFCIQDAGDV QLPNLGFEEH LNDTNAETTN AKVSPAASGG
0901: RMSWLQKCSR LFNLSPGKKV LDSSQHPLDN SNLYSSLDRE AFDGEASHKP AASYGVVDSS DSQRAQSVTG IGDNVESKRL CGVVEEPEPS FEVANNSIHI
1001: MRTQTQMDNG VRDVVDQLAM PSVSLNDREK YAPAGSDNLR VSFKQRQSQP GRRGRPKAVK RTHTIKAVVK DAKAILEQSS DEKNHGPHNG EAKDPRRVAQ
1101: TSGVTNSDPD AEDSEAHSES ISLGGHRKRR QILASAVPVE KRYNFRRSTI AATTTAAQTM SDQTKGFKAG YDRQLTGNEI LKEIGGEGSS RPAVEPVSDV
1201: VNSIIASNML QKTAAVGIAE VREISSQKIV QAESNDDTVK SVEVSYQSGE DGHILDDAAT GSRPATPSDD EDEDEEECEQ QNASVGRKLW TFFTT
0101: NTRTGSGVAF LKGKGKSAVE ALPPPPPLQA LLGENGSIGV VDQGDAEVWR SFREAGLLDE SSLQRKDRDA LVQRISELEK ELHEYQYNMG LLLIEKKDWA
0201: SKYEEIRQAL AEVDETLKKE KSACLASISE FAKREENLQK ALGVEQQCVS DLEKALREMR SELAEVKFTS DKKLDDAHAL EIGLEEKYLE VEQKLHAADA
0301: KLAEASRKSS DVDRKLEDVE AREHKLQKEY LLFDSGRKLH EKDITEQREH LRDWEQKLQD SQKRLVETQR YLNEREDRTN EADRVLKKKE ADAEEARKMI
0401: EATKKSLKTK EEEITKRLGS LAAKEKEVDV KVESLENKEK DLISREEKLN ARERVEIQKL LDDHNLLISS KKEEFELDLE KRRKSLSKEI ECKIREVEKK
0501: RREIDSMEEQ ITKREQALQM NLQKLMDKEK DVDLKSNDLK KWEESVQNDE KKLEKERQQL ASDSEEFLKS KSDLESLKAA IESRKEQIMK EEENLRLTKG
0601: EREEHLLLQS NLKQESEDCR ILKESLLRDT EDLQQQREKF EEEWEVLDEK RLALEAERKK FNDEREKFEK WRHDEEERLN NEALVARANF ERELEELNQK
0701: TEAFGEIMEH ERLEALEVLK RERADMAREL ELCKHELEMD MQKRQEDTEK KLLDKENDFQ RKRDLDFNQM ISLSSSNDLK IQKLKMEEDR LEREKEDLSS
0801: YRKRLEIDRL EIQKDIDALR MLSRNLKEQR EEFMKEKERF LAQAEQKTCK NCGLLVGDLD TFCIQDAGDV QLPNLGFEEH LNDTNAETTN AKVSPAASGG
0901: RMSWLQKCSR LFNLSPGKKV LDSSQHPLDN SNLYSSLDRE AFDGEASHKP AASYGVVDSS DSQRAQSVTG IGDNVESKRL CGVVEEPEPS FEVANNSIHI
1001: MRTQTQMDNG VRDVVDQLAM PSVSLNDREK YAPAGSDNLR VSFKQRQSQP GRRGRPKAVK RTHTIKAVVK DAKAILEQSS DEKNHGPHNG EAKDPRRVAQ
1101: TSGVTNSDPD AEDSEAHSES ISLGGHRKRR QILASAVPVE KRYNFRRSTI AATTTAAQTM SDQTKGFKAG YDRQLTGNEI LKEIGGEGSS RPAVEPVSDV
1201: VNSIIASNML QKTAAVGIAE VREISSQKIV QAESNDDTVK SVEVSYQSGE DGHILDDAAT GSRPATPSDD EDEDEEECEQ QNASVGRKLW TFFTT
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.