Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 27.26 | 97.39 |
| CDX96106 | Canola | cytosol | 67.82 | 95.63 |
| CDY67848 | Canola | nucleus | 58.16 | 82.64 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 62.63 | 70.9 |
| CDY46040 | Canola | cytosol | 68.82 | 69.33 |
| AT1G67230.1 | Thale cress | nucleus | 69.19 | 67.05 |
| CDY12630 | Canola | mitochondrion | 24.25 | 60.45 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 49.59 | 43.21 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 44.48 | 42.92 |
| Solyc02g089800.2.1 | Tomato | nucleus | 42.48 | 42.91 |
| Os02t0710102-01 | Rice | nucleus | 6.47 | 42.26 |
| KRH01492 | Soybean | nucleus | 45.76 | 42.15 |
| KRH45183 | Soybean | nucleus | 45.12 | 41.56 |
| PGSC0003DMT400008676 | Potato | cytosol | 41.39 | 41.5 |
| Solyc03g045050.2.1 | Tomato | nucleus | 43.12 | 40.53 |
| CDY19387 | Canola | nucleus | 36.28 | 34.73 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 7.57 | 34.73 |
| CDX98000 | Canola | nucleus | 36.19 | 34.02 |
| CDY45853 | Canola | cytosol | 29.35 | 33.68 |
| CDX81542 | Canola | nucleus | 30.08 | 33.57 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 35.64 | 32.5 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 32.73 | 31.06 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 32.45 | 31.01 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 32.27 | 30.94 |
| Zm00001d051600_P004 | Maize | nucleus | 32.45 | 30.51 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 31.81 | 30.45 |
| GSMUA_Achr11P... | Banana | nucleus | 35.28 | 29.88 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 23.7 | 25.32 |
| CDY45628 | Canola | nucleus, plastid | 22.15 | 24.23 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 33.64 | 23.11 |
| CDY60978 | Canola | nucleus, plastid | 22.61 | 20.38 |
| CDY08750 | Canola | nucleus | 10.03 | 20.04 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 11.21 | 17.45 |
Protein Annotations
| EnsemblPlants:CDY01790 | EnsemblPlantsGene:GSBRNA2T00112924001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 | ProteinID:CDY01790 |
| ProteinID:CDY01790.1 | SEG:seg | UniParc:UPI0004EECCCA | MapMan:20.4.3.1 | : | : |
Description
BnaC06g28300D
Coordinates
chrLK031929:-:280844..285771
Molecular Weight (calculated)
125439.0 Da
IEP (calculated)
4.853
GRAVY (calculated)
-1.092
Length
1097 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTPLKVWQR WSTPTKATNP DSNGKVSGMV SEIQYEDDPR RLPDRVSELE KELFEYQHNM GLLLLEKKEW SSKFEELQDE FDEANQCLKR ERNAHMVAMA
0101: DVEKREEGLR KALGIEKQCA ADLEKALREL RSENAEIKFT ADSKLMEANA LVRSVEEKSL EVEAKLRAVD ARLAEVSRKS SEVERRSKDV EARESSLQRE
0201: RFSHITEREA EEASLTKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANFALKK KEDDISSRIK ALALREQETD
0301: VLKKSIESKE RELLALQEKL DAREKVAVQQ LIDEHQAKLE AAQREFEMEM EQKRKSVDDS LRSKVAEVEK REAEWKHMEE KVAKREQALD KKLEKHKEKE
0401: KDFESRLKGV TGREKALKSE EKALETEKRK LAEDKENILS LIAEVEKIKA ENEVHLAEIR KEKEELRVTE EERSEYLRLQ TELKEQIEKC RSQQELLSKE
0501: VEDLKAQREC FEKEWEELDE KKAEIETELK NLADQKEKLE RNTHLEEERL RKEKQEAIDN MKREVETLEV AKAAFADTME HERSVISKKA ESERSQLLHD
0601: VEMLKRKLES DMQSKLEERE RELQAKEKLF EEEREKELSN INYLRDVARR EMMEVQSDRQ RIEKEKIEID ASKKILEEQQ TEIRKDVDDL VALTKKLKEQ
0701: REQFISERNR FLSSMESNRN CSNPCGELLA ALPEIDNLEM PNLSKLANVL QEEAPRQEMR DVSPTATDLG VPVQGGTVSW LRKCTSKILK LSPIKMADTS
0801: AFADQEPQST EQANVNSGPS AMLPAQSEND TRDVDVSDGD QSNIDSKAEE VAADSLSNLN ADGQSRLRGK ARTRRTRSVK AVVEDAKAIY GKSIEFNEAD
0901: DGSTGEPGRS DKGGASKNGR KRGRVGSLRA CTSEQDGNES DGKSDSVTGG EHQRGKRRQK IASEEQEEVV GQRYNLRRSR RVAGKTAIGK KNEETGGMQQ
1001: EEDGINCAQT TATASVGVAV SDNGVTANVV EIEGMADSEE TDAGSPKRTG ESAAASEDDV VNRTPEREYD GEEEDESDTE HPGNVSIGKK LWTFLTT
0101: DVEKREEGLR KALGIEKQCA ADLEKALREL RSENAEIKFT ADSKLMEANA LVRSVEEKSL EVEAKLRAVD ARLAEVSRKS SEVERRSKDV EARESSLQRE
0201: RFSHITEREA EEASLTKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANFALKK KEDDISSRIK ALALREQETD
0301: VLKKSIESKE RELLALQEKL DAREKVAVQQ LIDEHQAKLE AAQREFEMEM EQKRKSVDDS LRSKVAEVEK REAEWKHMEE KVAKREQALD KKLEKHKEKE
0401: KDFESRLKGV TGREKALKSE EKALETEKRK LAEDKENILS LIAEVEKIKA ENEVHLAEIR KEKEELRVTE EERSEYLRLQ TELKEQIEKC RSQQELLSKE
0501: VEDLKAQREC FEKEWEELDE KKAEIETELK NLADQKEKLE RNTHLEEERL RKEKQEAIDN MKREVETLEV AKAAFADTME HERSVISKKA ESERSQLLHD
0601: VEMLKRKLES DMQSKLEERE RELQAKEKLF EEEREKELSN INYLRDVARR EMMEVQSDRQ RIEKEKIEID ASKKILEEQQ TEIRKDVDDL VALTKKLKEQ
0701: REQFISERNR FLSSMESNRN CSNPCGELLA ALPEIDNLEM PNLSKLANVL QEEAPRQEMR DVSPTATDLG VPVQGGTVSW LRKCTSKILK LSPIKMADTS
0801: AFADQEPQST EQANVNSGPS AMLPAQSEND TRDVDVSDGD QSNIDSKAEE VAADSLSNLN ADGQSRLRGK ARTRRTRSVK AVVEDAKAIY GKSIEFNEAD
0901: DGSTGEPGRS DKGGASKNGR KRGRVGSLRA CTSEQDGNES DGKSDSVTGG EHQRGKRRQK IASEEQEEVV GQRYNLRRSR RVAGKTAIGK KNEETGGMQQ
1001: EEDGINCAQT TATASVGVAV SDNGVTANVV EIEGMADSEE TDAGSPKRTG ESAAASEDDV VNRTPEREYD GEEEDESDTE HPGNVSIGKK LWTFLTT
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.