Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G303400.1 | Wheat | nucleus | 97.39 | 97.73 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 92.6 | 92.76 |
| Os02t0710102-01 | Rice | nucleus | 11.67 | 79.76 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 70.03 | 69.55 |
| Zm00001d051600_P004 | Maize | nucleus | 68.9 | 67.78 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.2 | 45.6 |
| GSMUA_Achr8P14400_001 | Banana | cytosol | 38.85 | 37.07 |
| CDX96106 | Canola | cytosol | 25.0 | 36.89 |
| CDY12630 | Canola | mitochondrion | 13.59 | 35.45 |
| GSMUA_Achr11P... | Banana | nucleus | 39.11 | 34.67 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 32.49 | 32.69 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 30.23 | 32.52 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.01 | 32.45 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 27.18 | 32.2 |
| PGSC0003DMT400008676 | Potato | cytosol | 30.05 | 31.54 |
| KRH45183 | Soybean | nucleus | 32.58 | 31.4 |
| KRH01492 | Soybean | nucleus | 32.58 | 31.4 |
| Bra034012.1-P | Field mustard | cytosol | 30.4 | 31.3 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 34.32 | 31.29 |
| KRH75531 | Soybean | nucleus | 25.96 | 30.79 |
| CDY46040 | Canola | cytosol | 29.18 | 30.76 |
| Solyc02g089800.2.1 | Tomato | nucleus | 29.09 | 30.76 |
| Solyc03g045050.2.1 | Tomato | nucleus | 31.18 | 30.68 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 29.88 | 30.17 |
| AT1G67230.1 | Thale cress | nucleus | 29.27 | 29.68 |
| KRH70636 | Soybean | nucleus | 29.79 | 28.26 |
| CDX81542 | Canola | nucleus | 24.13 | 28.18 |
| CDX98000 | Canola | nucleus | 28.14 | 27.68 |
| AT1G13220.3 | Thale cress | nucleus | 27.26 | 27.43 |
| CDY19387 | Canola | nucleus | 27.26 | 27.31 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 37.89 | 27.24 |
| CDY45853 | Canola | cytosol | 22.65 | 27.2 |
| AT1G68790.1 | Thale cress | nucleus | 25.52 | 27.0 |
| CDY67848 | Canola | nucleus | 18.12 | 26.94 |
| Bra038353.1-P | Field mustard | cytosol | 23.43 | 24.75 |
| TraesCS3D01G302500.2 | Wheat | cytosol | 20.12 | 23.12 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G256200.1 | EnsemblPlantsGene:TraesCS6D01G256200 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 | SEG:seg |
| MapMan:20.4.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:361533163..361539676
Molecular Weight (calculated)
131265.0 Da
IEP (calculated)
4.946
GRAVY (calculated)
-1.209
Length
1148 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFTPQGKGWN GWSTPSPGNQ RAGGGAPPAS APLGKAKGTS QRAAELEQEL HEYQYNMGLL LIEKKEWAAK FDEVTHVLTQ KEEILKREQA AHLNAISEYE
0101: RREENMRKSL GVEKQCVADL EKALREIRSE IAEVKFTSQK KIADAQSLEA NLEEKSLEIE GKLHAADAKL AEANRKKSQA DRDLEEAEAR QRRLEKEKLY
0201: FETERKAREK QLKEQEESLQ DWEKKLKESQ NRLVDLQRSV NDREERANEN DKLCKIKQEE LEEAKKTVES TKIILKTKED DIAKRLNELR SQEKDADSKH
0301: KILEKREKKL SEREEKASAR EKMGLQKLIE DHEVKLEAKR RDFELELESE RKSFDERMKH READLVKKEK DLSSRENKIS KREQALNESK KKLEELQNDL
0401: DTKSKALKKW DESLKLEKDK LSEEKLQVDH ERKQAEMYRS DIERLKATIE AEKKQILEEQ NNLKVTEEER QEHSMLTAQL KKEIDEYRMR SNSLSEETED
0501: LRKQRQKFEE EWEQLDEKRA RLEEEAKVLK NEKTNLERWR HNEEKRFKDT QDEMDAKYKE QQDNLALKEK ALADDIKHQR EEIDEYLKRE RADLQRNLQL
0601: HRHELEMEIA NKLAIKQKEL EQKEDELNKK RDFVENELKH AVDLNESKIQ KITLEKQQLL REKEVLVEEK RKLETDKADI RRDIDSLHAL SNSLKDRREA
0701: YNRDRNNLID MFEKYKVCKS CGVSVFEGFG DLSLKDDADI DHPSLAVEGD DRSPNTDALA QDTGTLVNSA GRFSLLQKCS RLFKFSPRTK AEQSSEQEAE
0801: INIPFGVRLE EASPSEADYE PTPVYQAANN SFDAEGLPSD SGARGNEESE RLDIADDIQI ESSVGVADNC IDVHGSQPFA GANDMAVDTT IASVDQNGKD
0901: STAAPEVDLQ PEASNPPKRR GRPRGVKKTK SVRAVLEDAK VILGENFDEK NDDQEDSVTV GGTRKRRLAG PDISDEEISE AQSESVSVGG QRRKRRQPAG
1001: PSTQAPGEKR YNLRRTTVAN AAAAAPPPPE KKKGGRTGKK RTVETTADDT EGTSKAADSK RTGPSESADG ASQLQEFSQA ETVDAHATAG EEYGDIVVDG
1101: EQGEDAMPMT PSGSERGGVE DDDEDDDDDD SERRNKSIGK TLWSFFTT
0101: RREENMRKSL GVEKQCVADL EKALREIRSE IAEVKFTSQK KIADAQSLEA NLEEKSLEIE GKLHAADAKL AEANRKKSQA DRDLEEAEAR QRRLEKEKLY
0201: FETERKAREK QLKEQEESLQ DWEKKLKESQ NRLVDLQRSV NDREERANEN DKLCKIKQEE LEEAKKTVES TKIILKTKED DIAKRLNELR SQEKDADSKH
0301: KILEKREKKL SEREEKASAR EKMGLQKLIE DHEVKLEAKR RDFELELESE RKSFDERMKH READLVKKEK DLSSRENKIS KREQALNESK KKLEELQNDL
0401: DTKSKALKKW DESLKLEKDK LSEEKLQVDH ERKQAEMYRS DIERLKATIE AEKKQILEEQ NNLKVTEEER QEHSMLTAQL KKEIDEYRMR SNSLSEETED
0501: LRKQRQKFEE EWEQLDEKRA RLEEEAKVLK NEKTNLERWR HNEEKRFKDT QDEMDAKYKE QQDNLALKEK ALADDIKHQR EEIDEYLKRE RADLQRNLQL
0601: HRHELEMEIA NKLAIKQKEL EQKEDELNKK RDFVENELKH AVDLNESKIQ KITLEKQQLL REKEVLVEEK RKLETDKADI RRDIDSLHAL SNSLKDRREA
0701: YNRDRNNLID MFEKYKVCKS CGVSVFEGFG DLSLKDDADI DHPSLAVEGD DRSPNTDALA QDTGTLVNSA GRFSLLQKCS RLFKFSPRTK AEQSSEQEAE
0801: INIPFGVRLE EASPSEADYE PTPVYQAANN SFDAEGLPSD SGARGNEESE RLDIADDIQI ESSVGVADNC IDVHGSQPFA GANDMAVDTT IASVDQNGKD
0901: STAAPEVDLQ PEASNPPKRR GRPRGVKKTK SVRAVLEDAK VILGENFDEK NDDQEDSVTV GGTRKRRLAG PDISDEEISE AQSESVSVGG QRRKRRQPAG
1001: PSTQAPGEKR YNLRRTTVAN AAAAAPPPPE KKKGGRTGKK RTVETTADDT EGTSKAADSK RTGPSESADG ASQLQEFSQA ETVDAHATAG EEYGDIVVDG
1101: EQGEDAMPMT PSGSERGGVE DDDEDDDDDD SERRNKSIGK TLWSFFTT
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.