Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 63.51 | 59.0 |
| Os02t0710102-01 | Rice | nucleus | 7.15 | 51.19 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.8 | 46.25 |
| CDX96106 | Canola | cytosol | 26.18 | 40.49 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 37.57 | 39.1 |
| TraesCS6D01G256200.1 | Wheat | nucleus | 37.07 | 38.85 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 36.66 | 38.55 |
| Zm00001d051600_P004 | Maize | nucleus | 37.16 | 38.3 |
| HORVU6Hr1G069560.1 | Barley | nucleus | 35.99 | 37.78 |
| GSMUA_Achr9P21820_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 7.48 | 37.66 |
| VIT_01s0011g02810.t01 | Wine grape | mitochondrion, plastid | 35.58 | 37.51 |
| CDY12630 | Canola | mitochondrion | 13.05 | 35.68 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 32.5 | 35.64 |
| Bra004210.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.09 | 35.05 |
| PGSC0003DMT400026042 | Potato | cytosol, mitochondrion, nucleus, plastid | 33.0 | 34.92 |
| VIT_14s0006g03280.t01 | Wine grape | nucleus | 36.49 | 34.87 |
| Bra034012.1-P | Field mustard | cytosol | 32.09 | 34.62 |
| KRH01492 | Soybean | nucleus | 34.25 | 34.59 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 27.85 | 34.57 |
| Solyc03g045050.2.1 | Tomato | nucleus | 33.5 | 34.53 |
| KRH45183 | Soybean | nucleus | 34.16 | 34.51 |
| GSMUA_Achr6P09340_001 | Banana | cytosol | 45.8 | 34.5 |
| Solyc02g089800.2.1 | Tomato | nucleus | 30.76 | 34.07 |
| PGSC0003DMT400008676 | Potato | cytosol | 30.92 | 34.0 |
| CDY46040 | Canola | cytosol | 30.59 | 33.79 |
| AT1G67230.1 | Thale cress | nucleus | 30.92 | 32.86 |
| GSMUA_Achr3P28980_001 | Banana | mitochondrion | 27.76 | 32.52 |
| KRH75531 | Soybean | nucleus | 26.02 | 32.33 |
| AT1G68790.1 | Thale cress | nucleus | 28.84 | 31.98 |
| CDY19387 | Canola | nucleus | 30.17 | 31.68 |
| CDX81542 | Canola | nucleus | 25.6 | 31.33 |
| CDY45853 | Canola | cytosol | 24.77 | 31.17 |
| CDX98000 | Canola | nucleus | 30.17 | 31.11 |
| KRH70636 | Soybean | nucleus | 31.17 | 30.99 |
| AT1G13220.3 | Thale cress | nucleus | 29.34 | 30.94 |
| CDY67848 | Canola | nucleus | 19.04 | 29.66 |
| Bra038353.1-P | Field mustard | cytosol | 25.27 | 27.97 |
| GSMUA_Achr9P21830_001 | Banana | nucleus | 14.63 | 24.96 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 22.03 | 23.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P14400_001 | EnsemblPlants:GSMUA_Achr8T14400_001 | EnsemblPlantsGene:GSMUA_Achr8G14400_001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF3 |
| SEG:seg | SUPFAM:SSF57997 | UniParc:UPI000295BAF7 | UniProt:M0TQE3 | MapMan:20.4.3.1 | : |
Description
nuclear matrix constituent protein 1-like, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G14400_001]
Coordinates
chr8:-:11255347..11271525
Molecular Weight (calculated)
137611.0 Da
IEP (calculated)
5.220
GRAVY (calculated)
-0.927
Length
1203 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFTPQKKGWP GWSPSPRVGD GVDNGMTTPV VNTRSGSVLA FLKGKGKGKG NNTAEALPLP LPLQASLGEN GDTVVVGGGD AEVWRNFREA GLLDESALQN
0101: KDREALVQRI LALEKELHEY QYNMGLLLIE KKDWALKYEE IRQALMDVEE TLKREKLAHL ASISEFEKRE ENLQKALGVE QQCVSDLEKA LREMHSELAE
0201: VKFTSDKKLD DAHALEAGLE EKYLEVEQKL HSADAKLAEA SRKSSVANRK LEDVEAREHK LQKEYLSLSS EWKLHEKGIT EQREHLCYWE KKLQDSQKRL
0301: VESQRFLNQR EYQANEADRF HKKKEAELEE SRKMIEATKK SLKSKEEDIT IKLRSIAAKE KEIDVKIESL GKKEKDLFSR EETLNARERV EIQKLLDDHN
0401: ALLISKREEF ELNLEKRRKS FDADLEGKVH EVEEKKREID CMEDQVKKRE QALEINLQKL MDKEKELDSK SKASKKWEES VKNDERKLEK DRQHLASECE
0501: ELLKCNSELE SLKAAIESSK KQIINEEENL RLTKVEREDH LLLQSNLKQE ILDCRLMKEL LLRDTEDLQL QRKKFEEEWE VLDEKRLALE AEIKKFNDER
0601: EKVEKWQCHE KERLNSEALI AKANFERELE ELSQKEEALE KAMEHERLEA FELLKREHAD MDRELELRKH ELQMDMQKMQ GMEKKLLDKE NEFQRTRDLE
0701: LSQMISLSSL NDSKSKRLKM EEDRLEREKE DILSHRKRLE VEQLEIEKDI DALCMLSRNL KEQREEFMKE KEHFLDQAEQ KTCKNCGHPL GDMGTYCILD
0801: AGNVLLPNLV FEERSNNMNA KSSPNAMVSV PAASGGRMSW LQKCSRLFSP GKKTSCKPVS FHGVADFSYR QENKEPKRLG EAGEEPEPSL EVADNSIDIM
0901: RTWMDNGARE VVDDYVMPSF AQNERENFAP AESDTLPESL KQRRSQPRRR GRPKAVKRTG TTKAVVTDVK AILGKSSNEK NHGSQDLVLA NSTTSAGQKR
1001: CVAQISGMTT SDLNLGDSEA HSESISLGGR HKKRQILAPA AQIPGEKRYN FRHSAIAAVT TAAQTIFERT KGPKAGGHED STGNEIPMQS GGEEGSARPV
1101: VEPVSDVDSK KASNMLQKTA VESTTEVHEI FPNKIVQAES NDDVKSVEHS DQSEDGFVVD DAATGTDPAT PSNGGCSEDD EDEEEYDQLN ASIGKKLWTF
1201: FTR
0101: KDREALVQRI LALEKELHEY QYNMGLLLIE KKDWALKYEE IRQALMDVEE TLKREKLAHL ASISEFEKRE ENLQKALGVE QQCVSDLEKA LREMHSELAE
0201: VKFTSDKKLD DAHALEAGLE EKYLEVEQKL HSADAKLAEA SRKSSVANRK LEDVEAREHK LQKEYLSLSS EWKLHEKGIT EQREHLCYWE KKLQDSQKRL
0301: VESQRFLNQR EYQANEADRF HKKKEAELEE SRKMIEATKK SLKSKEEDIT IKLRSIAAKE KEIDVKIESL GKKEKDLFSR EETLNARERV EIQKLLDDHN
0401: ALLISKREEF ELNLEKRRKS FDADLEGKVH EVEEKKREID CMEDQVKKRE QALEINLQKL MDKEKELDSK SKASKKWEES VKNDERKLEK DRQHLASECE
0501: ELLKCNSELE SLKAAIESSK KQIINEEENL RLTKVEREDH LLLQSNLKQE ILDCRLMKEL LLRDTEDLQL QRKKFEEEWE VLDEKRLALE AEIKKFNDER
0601: EKVEKWQCHE KERLNSEALI AKANFERELE ELSQKEEALE KAMEHERLEA FELLKREHAD MDRELELRKH ELQMDMQKMQ GMEKKLLDKE NEFQRTRDLE
0701: LSQMISLSSL NDSKSKRLKM EEDRLEREKE DILSHRKRLE VEQLEIEKDI DALCMLSRNL KEQREEFMKE KEHFLDQAEQ KTCKNCGHPL GDMGTYCILD
0801: AGNVLLPNLV FEERSNNMNA KSSPNAMVSV PAASGGRMSW LQKCSRLFSP GKKTSCKPVS FHGVADFSYR QENKEPKRLG EAGEEPEPSL EVADNSIDIM
0901: RTWMDNGARE VVDDYVMPSF AQNERENFAP AESDTLPESL KQRRSQPRRR GRPKAVKRTG TTKAVVTDVK AILGKSSNEK NHGSQDLVLA NSTTSAGQKR
1001: CVAQISGMTT SDLNLGDSEA HSESISLGGR HKKRQILAPA AQIPGEKRYN FRHSAIAAVT TAAQTIFERT KGPKAGGHED STGNEIPMQS GGEEGSARPV
1101: VEPVSDVDSK KASNMLQKTA VESTTEVHEI FPNKIVQAES NDDVKSVEHS DQSEDGFVVD DAATGTDPAT PSNGGCSEDD EDEEEYDQLN ASIGKKLWTF
1201: FTR
0001: MSTPLKVWQR WSTPTKATNP DSNGSSHGTG LDMVTPVSGR VSEIQFDDPR ILPEKISELE KELFEYQHSM GLLLIEKKEW SSQYEALQQA FEEVNECLKQ
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
0101: ERNAHLIAIA DVEKREEGLR KALGIEKQCA LDLEKALKEL RAENAEIKFT ADSKLTEANA LVRSVEEKSL EVEAKLRAVD AKLAEVSRKS SDVERKAKEV
0201: EARESSLQRE RFSYIAEREA DEATLSKQRE DLREWERKLQ EGEERVAKSQ MIVKQREDRA NESDKIIKQK GKELEEAQKK IDAANLAVKK LEDDVSSRIK
0301: DLALREQETD VLKKSIETKA RELQALQEKL EAREKMAVQQ LVDEHQAKLD STQREFELEM EQKRKSIDDS LKSKVAEVEK REAEWKHMEE KVAKREQALD
0401: RKLEKHKEKE NDFDLRLKGI SGREKALKSE EKALETEKKK LLEDKEIILN LKALVEKVSG ENQAQLSEIN KEKDELRVTE EERSEYLRLQ TELKEQIEKC
0501: RSQQELLQKE AEDLKAQRES FEKEWEELDE RKAKIGNELK NITDQKEKLE RHIHLEEERL KKEKQAANEN MERELETLEV AKASFAETME YERSMLSKKA
0601: ESERSQLLHD IEMRKRKLES DMQTILEEKE RELQAKKKLF EEEREKELSN INYLRDVARR EMMDMQNERQ RIEKEKLEVD SSKNHLEEQQ TEIRKDVDDL
0701: VALTKKLKEQ REQFISERSR FLSSMESNRN CSRCGELLSE LVLPEIDNLE MPNMSKLANI LDNEAPRQEM RDISPTAAGL GLPVTGGKVS WFRKCTSKML
0801: KLSPIKMTEP SVTWNLADQE PQSTEQANVG GPSTTVQAAT TYSFDVQKAE SETGTKEVEV TNVNSDGDQS DINSKAQEVA ADSLSNLDVD GQSRMKGKGK
0901: ARTRRTRSVK DVVDDAKALY GESINLYEPN DSTENVDDST KASTGETGRS DKAISKNGRK RGRVGSLRTC TTEQDGNESD GKSDSVTGGA HQRKRRQKVA
1001: SEQQGEVVGQ RYNLRRPRRV TGEPALSKKN EDIGGVQQEE GIHCTQATAT ASVGVAVSDN GVSTNVVQHE ATADSEDTDA GSPKRTDESE AMSEDVNKTP
1101: LRADSDGEDD ESDAEHPGKV SIGKKLWTFL TT
Arabidopsis Description
CRWN1Protein CROWDED NUCLEI 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HRT5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.