Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G65780.2 | Thale cress | plastid | 77.37 | 76.23 |
| AT5G65770.2 | Thale cress | plastid | 77.17 | 74.28 |
| CDY08750 | Canola | nucleus | 39.18 | 71.58 |
| CDY60978 | Canola | nucleus, plastid | 72.88 | 60.07 |
| KRH28315 | Soybean | cytosol | 34.99 | 47.69 |
| PGSC0003DMT400055146 | Potato | plastid | 41.67 | 44.61 |
| VIT_00s0558g00020.t01 | Wine grape | plastid | 48.85 | 43.87 |
| KRH58169 | Soybean | nucleus | 45.36 | 43.42 |
| KRH04371 | Soybean | cytosol | 45.36 | 43.33 |
| Solyc02g091960.2.1 | Tomato | nucleus | 20.24 | 41.77 |
| KRH77170 | Soybean | cytosol | 30.81 | 41.42 |
| TraesCS3D01G302500.2 | Wheat | cytosol | 33.9 | 34.03 |
| Zm00001d043335_P006 | Maize | extracellular, mitochondrion | 33.0 | 34.02 |
| HORVU3Hr1G074480.3 | Barley | plasma membrane | 33.6 | 33.9 |
| TraesCS3B01G337300.1 | Wheat | cytosol | 33.8 | 33.87 |
| TraesCS3A01G299200.1 | Wheat | cytosol | 34.0 | 33.76 |
| KXG33452 | Sorghum | cytosol | 33.3 | 33.47 |
| CDY67849 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.97 | 32.57 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 36.99 | 32.46 |
| CDX96106 | Canola | cytosol | 21.93 | 28.28 |
| CDY12630 | Canola | mitochondrion | 11.37 | 25.91 |
| CDY12631 | Canola | golgi, mitochondrion, nucleus, plastid | 22.73 | 23.53 |
| CDY01790 | Canola | cytosol, mitochondrion, nucleus, plastid | 24.23 | 22.15 |
| CDX81542 | Canola | nucleus | 20.44 | 20.85 |
| CDY46040 | Canola | cytosol | 22.63 | 20.84 |
| CDY19387 | Canola | nucleus | 23.73 | 20.77 |
| CDY45853 | Canola | cytosol | 19.44 | 20.4 |
| CDX98000 | Canola | nucleus | 23.33 | 20.05 |
| CDY67848 | Canola | nucleus | 13.76 | 17.88 |
Protein Annotations
| EnsemblPlants:CDY45628 | EnsemblPlantsGene:GSBRNA2T00082366001 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF2 | ProteinID:CDY45628 |
| ProteinID:CDY45628.1 | SEG:seg | UniParc:UPI0004EEC179 | UniProt:A0A078I912 | MapMan:20.4.3.1 | : |
Description
BnaCnng13360DBnaCnng13360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I912]
Coordinates
chrLK032630:+:176039..180318
Molecular Weight (calculated)
116198.0 Da
IEP (calculated)
4.937
GRAVY (calculated)
-1.019
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATYSSERLP RTPATTRLAV TPGSRVLKSP LSDEEVMWKR LKEAGFDEQS IKQRDKAALI AYIAKLESEV YDYQHNMGLL ILEKDQLLSK YEEVKASVDE
0101: ADLAHRRDLS AYVSALAESK KREEGLNKDV GIAKECISSL EKTLHEIRAE CAETKVSAGS KMSEAHTMIE DALKKFADAE AKMRAAEALQ SEANRYHRIA
0201: ERKLKEVESR QDDLARRLAS FKSESETREN EIVIERQTLS ERRKSLQQEH ERLLDAKASL NQREDHIFGR SQELAELEKG LESAKTTFEE ERRALEDKKF
0301: SLEIELASLA KREVAVSERE SSLLEKEQEL LVAEEKIASK ESELIQKVLA NQEVILRKRK SVVEAELESK CKLAEDEIES KRRAWELREV DIKQKEDLVG
0401: EKEHDLEVQS RILAEKEKDI TERSYSLDEE EKHLNATEED ISRKTNLLEN EKERLRKLDS DLQQALISLE DKRKRVDSAT EKLEALKSET SELSILEMKL
0501: KEELDDMRGQ KLELLAEADR MKVEKAKFEA EWEHIDVKRE ELRKEAEYIT RQREAFSMYL KDERDNIREE RDALRNQHKN DVEALNRERE EFMNKMVEEH
0601: SEWLSKIQRE RADFLLGIET QKRELEYCIE NRREELENSS REREKAFEQE KKLEEERIQS LKESAKKDLE HVQVELKRLD AERLEIKLDR ERREREWSEL
0701: KDSVEELKVQ REKLETQRHM LRSEREEIRH EVEELKKLEN LKVTLDDMSM AKMQLSNLER SWEKVSALKQ KVVVTRDEEL DLQNGISTVS NSKDGYNSNN
0801: GSRSPSSATP FSWIKQYTNL IFKNPPETSL PLHHHEEGAL PSEKREEKAY TEGMLIAVEK LEAGKKRRGN ASGNDTSEPS SHKKRKHEVT QKSSDEADPE
0901: SVISSPQNVP EDKHELPSNQ TQAPPSGMVV LSEIVKITKV TCETEVINKV SNIECSDDPS EAGTKMVEEE KQDCDCNQTG IKEKDSDDGG HWNSMNPQGF
1001: VSG
0101: ADLAHRRDLS AYVSALAESK KREEGLNKDV GIAKECISSL EKTLHEIRAE CAETKVSAGS KMSEAHTMIE DALKKFADAE AKMRAAEALQ SEANRYHRIA
0201: ERKLKEVESR QDDLARRLAS FKSESETREN EIVIERQTLS ERRKSLQQEH ERLLDAKASL NQREDHIFGR SQELAELEKG LESAKTTFEE ERRALEDKKF
0301: SLEIELASLA KREVAVSERE SSLLEKEQEL LVAEEKIASK ESELIQKVLA NQEVILRKRK SVVEAELESK CKLAEDEIES KRRAWELREV DIKQKEDLVG
0401: EKEHDLEVQS RILAEKEKDI TERSYSLDEE EKHLNATEED ISRKTNLLEN EKERLRKLDS DLQQALISLE DKRKRVDSAT EKLEALKSET SELSILEMKL
0501: KEELDDMRGQ KLELLAEADR MKVEKAKFEA EWEHIDVKRE ELRKEAEYIT RQREAFSMYL KDERDNIREE RDALRNQHKN DVEALNRERE EFMNKMVEEH
0601: SEWLSKIQRE RADFLLGIET QKRELEYCIE NRREELENSS REREKAFEQE KKLEEERIQS LKESAKKDLE HVQVELKRLD AERLEIKLDR ERREREWSEL
0701: KDSVEELKVQ REKLETQRHM LRSEREEIRH EVEELKKLEN LKVTLDDMSM AKMQLSNLER SWEKVSALKQ KVVVTRDEEL DLQNGISTVS NSKDGYNSNN
0801: GSRSPSSATP FSWIKQYTNL IFKNPPETSL PLHHHEEGAL PSEKREEKAY TEGMLIAVEK LEAGKKRRGN ASGNDTSEPS SHKKRKHEVT QKSSDEADPE
0901: SVISSPQNVP EDKHELPSNQ TQAPPSGMVV LSEIVKITKV TCETEVINKV SNIECSDDPS EAGTKMVEEE KQDCDCNQTG IKEKDSDDGG HWNSMNPQGF
1001: VSG
0001: MATSSRSERF PITPSTAATN RLTITPNSRV LKSPLTEEIM WKRLKDAGFD EQSIKNRDKA ALIAYIAKLE SEVYDYQHNM GLLLLEKNEL SSQYEEIKAS
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
Arabidopsis Description
LINC4little nuclei4 [Source:TAIR;Acc:AT5G65770]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.