Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28315 | Soybean | cytosol | 57.37 | 58.15 |
| KRH04371 | Soybean | cytosol | 57.51 | 40.86 |
| KRH58169 | Soybean | nucleus | 56.97 | 40.55 |
| PGSC0003DMT400055146 | Potato | plastid | 41.29 | 32.87 |
| Bra037827.1-P | Field mustard | nucleus, plastid | 42.76 | 31.52 |
| AT5G65780.2 | Thale cress | plastid | 42.36 | 31.04 |
| VIT_00s0558g00020.t01 | Wine grape | plastid | 46.25 | 30.89 |
| CDY45628 | Canola | nucleus, plastid | 41.42 | 30.81 |
| AT5G65770.2 | Thale cress | plastid | 42.36 | 30.33 |
| CDY08750 | Canola | nucleus | 20.51 | 27.87 |
| Solyc02g091960.2.1 | Tomato | nucleus | 17.29 | 26.54 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 40.08 | 26.16 |
| CDY60978 | Canola | nucleus, plastid | 42.49 | 26.05 |
| Zm00001d043335_P006 | Maize | extracellular, mitochondrion | 33.91 | 26.0 |
| TraesCS3A01G299200.1 | Wheat | cytosol | 34.45 | 25.45 |
| TraesCS3B01G337300.1 | Wheat | cytosol | 34.05 | 25.37 |
| TraesCS3D01G302500.2 | Wheat | cytosol | 33.91 | 25.33 |
| KXG33452 | Sorghum | cytosol | 33.51 | 25.05 |
| HORVU3Hr1G074480.3 | Barley | plasma membrane | 33.11 | 24.85 |
| KRH75531 | Soybean | nucleus | 23.99 | 18.49 |
| KRH01492 | Soybean | nucleus | 27.21 | 17.04 |
| KRH45183 | Soybean | nucleus | 26.94 | 16.88 |
| KRH70636 | Soybean | nucleus | 26.27 | 16.2 |
Protein Annotations
| EMBL:ACUP02000659 | EnsemblPlants:KRH77170 | EnsemblPlantsGene:GLYMA_01G196400 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF2 |
| ProteinID:KRH77170 | ProteinID:KRH77170.1 | SEG:seg | UniParc:UPI000296E892 | UniProt:K7K4S0 | MapMan:20.4.3.1 |
Description
hypothetical protein
Coordinates
chr1:-:53069775..53074865
Molecular Weight (calculated)
87623.5 Da
IEP (calculated)
5.395
GRAVY (calculated)
-0.882
Length
746 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCLIFERKE LASKYEQVKA SIDSSEFMCK HDSTMTLSAL IEARKREESL KKAVGVTEAC ILEKALLEMR TECVVFLLES KVSEAHQLID EAQKKSTEAE
101: AEAKLLAAAS FQAKACGYNG VAGRKLRDVE AREDELKWQI ISFKSEYVFK EIIRERQSIS ERQESLQQEQ ERLLQSQALL NQREDHLFIR SQELDSLQKE
201: LEDIGKRESE LNKKERELLD FQVKLASRES LSYKLVENEI EMRRRAWELK EVDLTQREEQ LLERKHELEI LSRTLGEKEK DLLDMSSALK EKDQSLKASE
301: KELELNKVLL QKEKEEINIT KLDVQKSLSV LEVKLKEEIA LVRSQKLEIV AEADKLKAEK AKFEVEWELL DEKKEELQKE AEYIAEAKKA VSAFIKEYDK
401: LRQEKENMRD QYKRDLESVT CEREEFMTKM AERPMTMDLQ DTRTPLPNSH EHDEWFGKMQ QERADFLRDV EMQKRNMNTL IEKRHEEIES CLKEREKSFE
501: EEKNNELEYI NALKEKAAKE SQQVSFEMRR LETERAEISL DREQRKKEWA ELNKCIEELK VQRDKLQNQR ELILKLSLMI LLTEFFNSDM ESMKKKLKLR
601: TLKHDDHLNS PKEIEANKNS NGFDTPFVQK SSVVSPPSPV RSSWIKRCTE LHLTNDNSLD NVGKRQQRRF SFGEPKVILD VPSPAEDVYR VSDFESEIKK
701: HVNRTVPLVW DGCNVSKWKR GRGNFGIGDP LQDTLKDKKL RSEDNQ
101: AEAKLLAAAS FQAKACGYNG VAGRKLRDVE AREDELKWQI ISFKSEYVFK EIIRERQSIS ERQESLQQEQ ERLLQSQALL NQREDHLFIR SQELDSLQKE
201: LEDIGKRESE LNKKERELLD FQVKLASRES LSYKLVENEI EMRRRAWELK EVDLTQREEQ LLERKHELEI LSRTLGEKEK DLLDMSSALK EKDQSLKASE
301: KELELNKVLL QKEKEEINIT KLDVQKSLSV LEVKLKEEIA LVRSQKLEIV AEADKLKAEK AKFEVEWELL DEKKEELQKE AEYIAEAKKA VSAFIKEYDK
401: LRQEKENMRD QYKRDLESVT CEREEFMTKM AERPMTMDLQ DTRTPLPNSH EHDEWFGKMQ QERADFLRDV EMQKRNMNTL IEKRHEEIES CLKEREKSFE
501: EEKNNELEYI NALKEKAAKE SQQVSFEMRR LETERAEISL DREQRKKEWA ELNKCIEELK VQRDKLQNQR ELILKLSLMI LLTEFFNSDM ESMKKKLKLR
601: TLKHDDHLNS PKEIEANKNS NGFDTPFVQK SSVVSPPSPV RSSWIKRCTE LHLTNDNSLD NVGKRQQRRF SFGEPKVILD VPSPAEDVYR VSDFESEIKK
701: HVNRTVPLVW DGCNVSKWKR GRGNFGIGDP LQDTLKDKKL RSEDNQ
0001: MATSSRSERF PITPSTAATN RLTITPNSRV LKSPLTEEIM WKRLKDAGFD EQSIKNRDKA ALIAYIAKLE SEVYDYQHNM GLLLLEKNEL SSQYEEIKAS
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
Arabidopsis Description
LINC4little nuclei4 [Source:TAIR;Acc:AT5G65770]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.