Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G302500.2 | Wheat | cytosol | 96.5 | 96.7 |
| TraesCS3A01G299200.1 | Wheat | cytosol | 97.3 | 96.44 |
| HORVU3Hr1G074480.3 | Barley | plasma membrane | 90.51 | 91.15 |
| Zm00001d043335_P006 | Maize | extracellular, mitochondrion | 60.24 | 61.97 |
| KXG33452 | Sorghum | cytosol | 61.74 | 61.92 |
| Solyc02g091960.2.1 | Tomato | nucleus | 19.38 | 39.92 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 42.86 | 37.53 |
| KRH28315 | Soybean | cytosol | 27.37 | 37.23 |
| PGSC0003DMT400055146 | Potato | plastid | 34.37 | 36.71 |
| VIT_00s0558g00020.t01 | Wine grape | plastid | 38.66 | 34.65 |
| KRH77170 | Soybean | cytosol | 25.37 | 34.05 |
| AT5G65780.2 | Thale cress | plastid | 34.47 | 33.89 |
| CDY45628 | Canola | nucleus, plastid | 33.87 | 33.8 |
| AT5G65770.2 | Thale cress | plastid | 34.67 | 33.3 |
| KRH58169 | Soybean | nucleus | 34.77 | 33.21 |
| KRH04371 | Soybean | cytosol | 34.57 | 32.95 |
| Bra037827.1-P | Field mustard | nucleus, plastid | 33.27 | 32.91 |
| CDY60978 | Canola | nucleus, plastid | 33.17 | 27.28 |
| CDY08750 | Canola | nucleus | 14.79 | 26.96 |
| TraesCS6B01G303400.1 | Wheat | nucleus | 23.18 | 20.28 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G337300.1 | EnsemblPlantsGene:TraesCS3B01G337300 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF2 | SEG:seg |
| MapMan:20.4.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:543687915..543693134
Molecular Weight (calculated)
116085.0 Da
IEP (calculated)
4.752
GRAVY (calculated)
-0.981
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPRSPAAG ALAGDEAIWR KLREAGFDEE SIRRRDKAAL IAYISRLETE VYDYQHNLGL MLLERKELVS KHEQLKASME SAEIMHKRER ASQQSALAET
0101: RKREENLKKN VGIQKECVAN LEKALHDMRA ETAEIKVSYE TKSAEALEMM DTAQKKFDEA EEKLLAAKSL EAECTRARNA ALRTLQDMEE REDQLRRYRL
0201: SSDHEYEAKE KDISLQRKSL NDMKKMLHEK EQVLLKEQSL LNQRDENIVE RLARVTQSEK KLEEDKVILE AERMALMEEK NKLDLKMEAV ASREEAIIQK
0301: ESLLDKWESE LLILQETIAN KERVEIERLN HEQEMALERR KLEFETEMEN KRLSFEAEME TKRTLLDQRE RALSGQELAF AQRDQNVDIR LAELASKEEA
0401: IARRTDELKD EEGKLLSQRE ASYIELQKER EEVQKLKLYL EKEKVLFEEE KREAIQAQQN LAITQADRDD LLTLQIKLKE EIDNLRAQRM ELVADADRLQ
0501: AEKERFEIEW ELFDEKKEEL QKEAARITEE RRVMTEYLNN QSDIIKQEKE NLRAEFKKNS ETLSCEHEEF MSKMQQEHAS WLTKIQHERE DLTRDIDNQR
0601: MELLNLAKAR QMEIDADLRE REKEFEQKKS MELEHINSQK VMIMSKLDHV ALELQKLEDE RKEANLEREK REQELSEIKN TIEALNNQRE KLQEQRKLLH
0701: SDRESITEQI QQLDVLKELK SDSENKQLSL IDSEKSKMNY TGLLPCGEVH NSTPKNCSAP KLLERKLEVS PSVSTPVSWV RKCAQVIFKR SPEKSSGHDN
0801: GRLLHNGAPK NLRKTADING SLADELGDQA GEIPEVVNGA KVGKKRNYLL SYDPSEALEP RRKYQRSTIQ TVIGGEITLN NCPSVLEEKC SKNEHDAAPL
0901: GVLSGISKDH EYSNKGPQNL RIPVDSASSD DLAFANGKAD NSDFADEDEP SEEITVSATE PTTGAVEGRD EHDEDTDDED EEEEEEEKSS SAKKLWRFLI
1001: T
0101: RKREENLKKN VGIQKECVAN LEKALHDMRA ETAEIKVSYE TKSAEALEMM DTAQKKFDEA EEKLLAAKSL EAECTRARNA ALRTLQDMEE REDQLRRYRL
0201: SSDHEYEAKE KDISLQRKSL NDMKKMLHEK EQVLLKEQSL LNQRDENIVE RLARVTQSEK KLEEDKVILE AERMALMEEK NKLDLKMEAV ASREEAIIQK
0301: ESLLDKWESE LLILQETIAN KERVEIERLN HEQEMALERR KLEFETEMEN KRLSFEAEME TKRTLLDQRE RALSGQELAF AQRDQNVDIR LAELASKEEA
0401: IARRTDELKD EEGKLLSQRE ASYIELQKER EEVQKLKLYL EKEKVLFEEE KREAIQAQQN LAITQADRDD LLTLQIKLKE EIDNLRAQRM ELVADADRLQ
0501: AEKERFEIEW ELFDEKKEEL QKEAARITEE RRVMTEYLNN QSDIIKQEKE NLRAEFKKNS ETLSCEHEEF MSKMQQEHAS WLTKIQHERE DLTRDIDNQR
0601: MELLNLAKAR QMEIDADLRE REKEFEQKKS MELEHINSQK VMIMSKLDHV ALELQKLEDE RKEANLEREK REQELSEIKN TIEALNNQRE KLQEQRKLLH
0701: SDRESITEQI QQLDVLKELK SDSENKQLSL IDSEKSKMNY TGLLPCGEVH NSTPKNCSAP KLLERKLEVS PSVSTPVSWV RKCAQVIFKR SPEKSSGHDN
0801: GRLLHNGAPK NLRKTADING SLADELGDQA GEIPEVVNGA KVGKKRNYLL SYDPSEALEP RRKYQRSTIQ TVIGGEITLN NCPSVLEEKC SKNEHDAAPL
0901: GVLSGISKDH EYSNKGPQNL RIPVDSASSD DLAFANGKAD NSDFADEDEP SEEITVSATE PTTGAVEGRD EHDEDTDDED EEEEEEEKSS SAKKLWRFLI
1001: T
0001: MATSSRSERF PITPSTAATN RLTITPNSRV LKSPLTEEIM WKRLKDAGFD EQSIKNRDKA ALIAYIAKLE SEVYDYQHNM GLLLLEKNEL SSQYEEIKAS
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
Arabidopsis Description
LINC4little nuclei4 [Source:TAIR;Acc:AT5G65770]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.