Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043335_P006 | Maize | extracellular, mitochondrion | 83.27 | 85.41 |
| TraesCS3D01G302500.2 | Wheat | cytosol | 62.93 | 62.86 |
| TraesCS3B01G337300.1 | Wheat | cytosol | 61.92 | 61.74 |
| TraesCS3A01G299200.1 | Wheat | cytosol | 62.42 | 61.68 |
| HORVU3Hr1G074480.3 | Barley | plasma membrane | 60.62 | 60.87 |
| Solyc02g091960.2.1 | Tomato | nucleus | 18.64 | 38.27 |
| KRH28315 | Soybean | cytosol | 26.85 | 36.41 |
| PGSC0003DMT400055146 | Potato | plastid | 33.97 | 36.18 |
| GSMUA_Achr6P31730_001 | Banana | cytosol | 40.98 | 35.78 |
| VIT_00s0558g00020.t01 | Wine grape | plastid | 38.18 | 34.11 |
| KRH77170 | Soybean | cytosol | 25.05 | 33.51 |
| CDY45628 | Canola | nucleus, plastid | 33.47 | 33.3 |
| AT5G65780.2 | Thale cress | plastid | 33.67 | 33.01 |
| Bra037827.1-P | Field mustard | nucleus, plastid | 33.27 | 32.81 |
| AT5G65770.2 | Thale cress | plastid | 33.77 | 32.34 |
| KRH58169 | Soybean | nucleus | 32.97 | 31.39 |
| KRH04371 | Soybean | cytosol | 32.97 | 31.33 |
| CDY08750 | Canola | nucleus | 16.23 | 29.51 |
| CDY60978 | Canola | nucleus, plastid | 32.06 | 26.29 |
| KXG30901 | Sorghum | mitochondrion, nucleus | 22.24 | 19.2 |
Protein Annotations
| EnsemblPlants:KXG33452 | EnsemblPlantsGene:SORBI_3003G308200 | ncoils:Coil | PANTHER:PTHR31908 | PANTHER:PTHR31908:SF2 | ProteinID:KXG33452 |
| ProteinID:KXG33452.1 | SEG:seg | UniParc:UPI00081AB924 | UniProt:A0A1B6Q6A6 | MapMan:20.4.3.1 | : |
Description
hypothetical protein
Coordinates
chr3:-:63679792..63685332
Molecular Weight (calculated)
115365.0 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.981
Length
998 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPRSAGGV AGDEAIWRKL REAGFDEDAV RRRDKAALIG YISRLESEIY DYQHNLGLIL LEGKEMTSKY EQLKASSEAT EIMLKRERAS HLSALAETRK
101: REENLKRNLA IQKECISNLE KALHDMRGET AEVKVSYEAK LAEALQMIER AQKKFDEAEE KLLTAKSLEA ECIRTRSASL RSLQDIEDRE DQLRRYRTSL
201: ELENASKEKE INLLRKSLDD TKKVLHEKEQ SLLKEQLLLN QRDDNILERL GYITRSEKRL EEEKLNLEDE RKVLLEEKNK LDLNMQAIIS REEAIIQKES
301: ILDKRESELL VLQETIASKE RAEIERLRQE QEVALVRRRQ EFDTEMEIKL SSFEEEIDAR KALLDQRETA INEQEDAVAQ RKQNLNLRLA ELANKEESLV
401: KKSDELREEE KRLASERETL HMELEKEKEE IQNMKLDLEK EKSFFEEEKR EAIQAQENLA ITQNEREDLQ SLQVKLKDEI DSLRAQKVDL MVDAERLLAE
501: KERFEIEWEL IDEKKEELQK EAARIAEERR VMDEHLKDEL DIIKQEKEDL RVQFKSSAES LAREHDEFMN KMQQERASWL SRIQQEREDL KKDIDIQRIE
601: LLNSAKARQM EIDSYLREKE EEFEQKKSKE LEYINSEKEA INSKLEHARL ELQKLEEERK GAMLERERRE QELSEIKNTI NALNEQREKL QEQRKLLHSD
701: RESITLQIQQ LNELEELKIE SENKQLSLRQ CGKSKNGGVE NLKENGVHLS PDEDQNASPK QTSVKKLEVS PSVSTPISWV RKCAQVFIFK RSPEKSADPH
801: NDRLVPAKLA NAIDSSLAAA YSDGLFAHQL ENGAGKVPQT VDGLKVGKKR LNNALSHGDS EISQPKRKQQ RSTTQTLRVI GGEIDSNCSL SILEEKCSKN
901: EHDTVPVGLC GKGPHNTQAG ELPSSDDVPL VNGKSDASEV PEDDEHSEDI SVSAADPSNR HGVVDSVDKH EPDEDSDDEG EEEEKTSSAK KIWRFLIT
101: REENLKRNLA IQKECISNLE KALHDMRGET AEVKVSYEAK LAEALQMIER AQKKFDEAEE KLLTAKSLEA ECIRTRSASL RSLQDIEDRE DQLRRYRTSL
201: ELENASKEKE INLLRKSLDD TKKVLHEKEQ SLLKEQLLLN QRDDNILERL GYITRSEKRL EEEKLNLEDE RKVLLEEKNK LDLNMQAIIS REEAIIQKES
301: ILDKRESELL VLQETIASKE RAEIERLRQE QEVALVRRRQ EFDTEMEIKL SSFEEEIDAR KALLDQRETA INEQEDAVAQ RKQNLNLRLA ELANKEESLV
401: KKSDELREEE KRLASERETL HMELEKEKEE IQNMKLDLEK EKSFFEEEKR EAIQAQENLA ITQNEREDLQ SLQVKLKDEI DSLRAQKVDL MVDAERLLAE
501: KERFEIEWEL IDEKKEELQK EAARIAEERR VMDEHLKDEL DIIKQEKEDL RVQFKSSAES LAREHDEFMN KMQQERASWL SRIQQEREDL KKDIDIQRIE
601: LLNSAKARQM EIDSYLREKE EEFEQKKSKE LEYINSEKEA INSKLEHARL ELQKLEEERK GAMLERERRE QELSEIKNTI NALNEQREKL QEQRKLLHSD
701: RESITLQIQQ LNELEELKIE SENKQLSLRQ CGKSKNGGVE NLKENGVHLS PDEDQNASPK QTSVKKLEVS PSVSTPISWV RKCAQVFIFK RSPEKSADPH
801: NDRLVPAKLA NAIDSSLAAA YSDGLFAHQL ENGAGKVPQT VDGLKVGKKR LNNALSHGDS EISQPKRKQQ RSTTQTLRVI GGEIDSNCSL SILEEKCSKN
901: EHDTVPVGLC GKGPHNTQAG ELPSSDDVPL VNGKSDASEV PEDDEHSEDI SVSAADPSNR HGVVDSVDKH EPDEDSDDEG EEEEKTSSAK KIWRFLIT
0001: MATSSRSERF PITPSTAATN RLTITPNSRV LKSPLTEEIM WKRLKDAGFD EQSIKNRDKA ALIAYIAKLE SEVYDYQHNM GLLLLEKNEL SSQYEEIKAS
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
0101: VDESDLTHMR EKSAYVSALA EAKKREESLK KDVGIAKECI SSLEKTLHEM RAECAETKVS AGSTMSEAHV MIEDALKKLA DAEAKMRAAE ALQAEANRYH
0201: RIAERKLKEV ESREDDLTRR LASFKSECET KENEMVIERQ TLNERRKSLQ QEHERLLDAQ VSLNQREDHI FARSQELAEL EKGLDTAKTT FEEERKAFED
0301: KKSNLEIALA LCAKREEAVS ERESSLLKKE QELLVAEEKI ASKESELIQN VLANQEVILR KRKSDVEAEL ECKSKSVEVE IESKRRAWEL REVDIKQRED
0401: LVGEKEHDLE VQSRALAEKE KDITEKSFNL DEKEKNLVAT EEDINRKTTM LEDEKERLRK LDLELQQSLT SLEDKRKRVD SATQKLEALK SETSELSTLE
0501: MKLKEELDDL RAQKLEMLAE ADRLKVEKAK FEAEWEHIDV KREELRKEAE YITRQREAFS MYLKDERDNI KEERDALRNQ HKNDVESLNR EREEFMNKMV
0601: EEHSEWLSKI QRERADFLLG IEMQKRELEY CIENKREELE NSSRDREKAF EQEKKLEEER IQSLKEMAEK ELEHVQVELK RLDAERLEIK LDRERREREW
0701: AELKDSVEEL KVQREKLETQ RHMLRAERDE IRHEIEELKK LENLKVALDD MSMAKMQLSN LERSWEKVSA LKQKVVSRDD ELDLQNGVST VSNSEDGYNS
0801: SMERQNGLTP SSATPFSWIK RCTNLIFKTS PEKSTLMHHY EEEGGVPSEK LKLESSRREE KAYTEGLSIA VERLEAGRKR RGNTSGDETS EPSNNKKRKH
0901: DVTQKYSDEA DTQSVISSPQ NVPEDKHELP SSQTQTPSGM VVISETVKIT RVTCETEVTN KVTTLDCSES PSEAGRKMGE ETEDGDCNQT GINASETVIH
1001: NEAATEDICT
Arabidopsis Description
LINC4little nuclei4 [Source:TAIR;Acc:AT5G65770]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.