Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015885.1-P | Field mustard | cytosol, golgi, peroxisome | 100.0 | 99.46 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 92.93 | 96.61 |
| AT1G74890.1 | Thale cress | nucleus | 83.15 | 74.27 |
| CDX68161 | Canola | cytosol | 76.63 | 71.57 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 80.98 | 68.35 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 62.5 | 64.25 |
| CDY41014 | Canola | nucleus | 74.46 | 64.02 |
| CDY26701 | Canola | nucleus | 73.91 | 63.85 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 63.04 | 63.39 |
| CDY36905 | Canola | nucleus | 62.5 | 62.84 |
| CDY70164 | Canola | nucleus | 62.5 | 62.84 |
| CDX96681 | Canola | cytosol | 70.11 | 62.32 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 61.41 | 61.75 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 61.41 | 61.41 |
| CDX83788 | Canola | cytosol | 70.65 | 61.32 |
| Solyc03g113720.2.1 | Tomato | nucleus | 60.87 | 57.44 |
| PGSC0003DMT400063187 | Potato | cytosol | 60.87 | 56.0 |
| CDY59626 | Canola | cytosol | 37.5 | 54.33 |
| CDX72141 | Canola | cytosol | 37.5 | 54.33 |
| CDY71200 | Canola | cytosol | 37.5 | 54.33 |
| KRH03376 | Soybean | nucleus | 60.87 | 54.11 |
| CDX84366 | Canola | nucleus | 55.43 | 53.68 |
| CDY00336 | Canola | nucleus | 55.43 | 53.68 |
| CDX75990 | Canola | cytosol | 36.96 | 53.54 |
| KRH63457 | Soybean | cytosol | 58.7 | 52.94 |
| KRH57009 | Soybean | nucleus | 60.33 | 52.61 |
| KRH54462 | Soybean | cytosol | 58.15 | 52.45 |
| CDY35445 | Canola | cytosol | 45.65 | 52.17 |
| CDY22469 | Canola | cytosol | 44.57 | 51.9 |
| CDY65526 | Canola | cytosol | 42.93 | 50.0 |
| CDY27219 | Canola | cytosol, nucleus, plastid | 42.93 | 46.75 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 60.87 | 43.41 |
| CDY45155 | Canola | nucleus | 52.17 | 42.11 |
| CDY30913 | Canola | nucleus | 52.17 | 40.34 |
| CDX79942 | Canola | nucleus | 46.74 | 40.0 |
| CDY23856 | Canola | nucleus | 46.2 | 39.53 |
| CDY20630 | Canola | nucleus | 52.72 | 39.27 |
| CDX93424 | Canola | nucleus | 52.72 | 38.34 |
| CDY20948 | Canola | nucleus | 52.72 | 38.34 |
| CDY37975 | Canola | nucleus | 52.17 | 37.94 |
| CDY22518 | Canola | nucleus | 44.57 | 37.79 |
| CDY34890 | Canola | nucleus | 53.26 | 37.69 |
| CDY35419 | Canola | nucleus | 44.02 | 37.5 |
| CDY14761 | Canola | cytoskeleton, cytosol, nucleus | 45.11 | 37.39 |
| CDY66046 | Canola | nucleus | 51.09 | 37.15 |
| CDY07801 | Canola | nucleus | 53.26 | 36.98 |
| CDY06934 | Canola | cytosol | 44.57 | 36.94 |
| CDY06142 | Canola | cytosol | 46.2 | 36.02 |
| CDX72077 | Canola | cytosol | 45.65 | 35.74 |
| CDX76036 | Canola | nucleus | 43.48 | 35.56 |
| CDX67674 | Canola | cytosol | 45.11 | 35.47 |
| CDY30966 | Canola | cytosol | 42.93 | 34.05 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | GO:A0A078I5N8 | UniProt:A0A078I5N8 | EnsemblPlants:CDY45402 | ProteinID:CDY45402 |
| ProteinID:CDY45402.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00081912001 | InterPro:IPR001789 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF17 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TMHMM:TMhelix | UniParc:UPI0004EF4422 | SEG:seg |
Description
BnaA07g31820DBnaA07g31820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5N8]
Coordinates
chrLK032624:-:49711..51237
Molecular Weight (calculated)
20470.2 Da
IEP (calculated)
6.007
GRAVY (calculated)
0.158
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGDLSSSS STSELHVLAV DDSIVDRKVI ERLLRISACK VTTVESGTRA LQYLGLDGDK GSSGLKDLKV NLIVTDYSMP GLTGYELLKK IKESSAFREI
101: PVVIMSSENI QPRIEQCMTE GAEDFLLKPV KLADVKRLKE LIMRGGEAEQ EKTSNLISPK RILQNNIFFF IIFFIITITI IFIV
101: PVVIMSSENI QPRIEQCMTE GAEDFLLKPV KLADVKRLKE LIMRGGEAEQ EKTSNLISPK RILQNNIFFF IIFFIITITI IFIV
001: MALRDLSSSL SSSSSPELHV LAVDDSFVDR KVIERLLKIS ACKVTTVESG TRALQYLGLD GDNGSSGLKD LKVNLIVTDY SMPGLTGYEL LKKIKESSAL
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG
Arabidopsis Description
ARR15Two-component response regulator ARR15 [Source:UniProtKB/Swiss-Prot;Acc:Q7G8V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.