Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063187 | Potato | cytosol | 94.36 | 92.0 |
| CDY68129 | Canola | cytosol, nucleus, plastid | 56.92 | 62.01 |
| Bra018084.1-P | Field mustard | cytosol, nucleus, plastid | 56.92 | 62.01 |
| CDX73122 | Canola | cytosol, golgi, nucleus | 55.9 | 61.58 |
| CDY21807 | Canola | cytosol, nucleus, peroxisome | 57.95 | 61.41 |
| KRH54462 | Soybean | cytosol | 64.1 | 61.27 |
| KRH63457 | Soybean | cytosol | 64.1 | 61.27 |
| CDY59856 | Canola | cytosol, nucleus, peroxisome | 57.44 | 61.2 |
| CDY45402 | Canola | cytosol, golgi, peroxisome | 57.44 | 60.87 |
| CDY70164 | Canola | nucleus | 56.92 | 60.66 |
| CDY54257 | Canola | cytosol, nucleus, peroxisome | 56.92 | 60.66 |
| CDY36905 | Canola | nucleus | 56.92 | 60.66 |
| Bra033773.1-P | Field mustard | nucleus | 55.9 | 60.56 |
| Bra015885.1-P | Field mustard | cytosol, golgi, peroxisome | 57.44 | 60.54 |
| AT3G48100.1 | Thale cress | cytosol | 56.92 | 60.33 |
| AT5G62920.1 | Thale cress | cytosol | 57.44 | 60.22 |
| AT1G74890.1 | Thale cress | nucleus | 62.56 | 59.22 |
| KRH03376 | Soybean | nucleus | 62.56 | 58.94 |
| KRH57009 | Soybean | nucleus | 62.56 | 57.82 |
| CDY00336 | Canola | nucleus | 55.38 | 56.84 |
| CDX84366 | Canola | nucleus | 55.38 | 56.84 |
| Bra010132.1-P | Field mustard | nucleus | 55.38 | 56.84 |
| Solyc06g048930.2.1 | Tomato | cytosol, nucleus, plastid | 43.08 | 56.76 |
| CDX68161 | Canola | cytosol | 56.41 | 55.84 |
| Bra003782.1-P | Field mustard | cytosol | 56.41 | 55.84 |
| Solyc06g048600.2.1 | Tomato | cytosol, nucleus, plastid | 44.1 | 55.13 |
| CDY41014 | Canola | nucleus | 59.49 | 54.21 |
| AT1G19050.1 | Thale cress | cytosol | 56.92 | 53.88 |
| CDX96681 | Canola | cytosol | 56.92 | 53.62 |
| Bra016526.1-P | Field mustard | cytosol | 56.92 | 53.62 |
| CDY26701 | Canola | nucleus | 58.46 | 53.52 |
| Bra025708.1-P | Field mustard | nucleus | 58.46 | 53.52 |
| CDX83788 | Canola | cytosol | 57.44 | 52.83 |
| Bra019524.1-P | Field mustard | cytosol | 35.9 | 52.24 |
| Solyc02g071220.2.1 | Tomato | nucleus | 42.05 | 49.4 |
| VIT_17s0000g07580.t01 | Wine grape | cytosol, nucleus, plastid | 65.13 | 49.22 |
| CDX85860 | Canola | endoplasmic reticulum, golgi, vacuole | 54.36 | 48.62 |
| Solyc05g006420.2.1 | Tomato | nucleus | 54.36 | 42.23 |
| Solyc10g079600.1.1 | Tomato | nucleus | 44.1 | 37.89 |
| Solyc10g079700.1.1 | Tomato | nucleus | 44.62 | 36.4 |
Protein Annotations
| MapMan:11.4.2.5 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000160 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | UniProt:K4BKM4 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF36 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc03g113720.2 | EnsemblPlants:Solyc03g113720.2.1 | UniParc:UPI0002767E02 |
Description
No Description!
Coordinates
chr3:-:63783502..63785382
Molecular Weight (calculated)
21753.4 Da
IEP (calculated)
5.811
GRAVY (calculated)
-0.390
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMAQELHVL AVDDSHVDRK VIERLLKISC CKVTAVESGT RALQYLGLDG EKSSMGIDGL KVNLILTDYS MPGMTGYELL KKIKESSVLS KIPVVIMSSE
101: KILPRIDRCL EEGAEEFLLK PVKLSDVKRL RDFILRGEGD DNKETEKNIE QVCSRKRKLQ DDPTTQSIPS PVVTAHDIES SPESQQPLSK QSKIG
101: KILPRIDRCL EEGAEEFLLK PVKLSDVKRL RDFILRGEGD DNKETEKNIE QVCSRKRKLQ DDPTTQSIPS PVVTAHDIES SPESQQPLSK QSKIG
001: MALRDLSSSL SSSSSPELHV LAVDDSFVDR KVIERLLKIS ACKVTTVESG TRALQYLGLD GDNGSSGLKD LKVNLIVTDY SMPGLTGYEL LKKIKESSAL
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG
Arabidopsis Description
ARR15Two-component response regulator ARR15 [Source:UniProtKB/Swiss-Prot;Acc:Q7G8V2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.