Factsheet for Bra015885.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009364.1-P
Bra010807.1-P
Bra021909.1-P
Bra022976.1-P
Bra023252.1-P
Bra030181.1-P
Bra030182.1-P
Bra030592.1-P
Bra033666.1-P
Bra035511.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74890.1	Bra030592.1-P	AT1G04850.1	18642946
AT1G74890.1	Bra010807.1-P	AT1G29910.1	18642946
AT1G74890.1	Bra021909.1-P	AT1G29910.1	18642946
AT1G74890.1	Bra022976.1-P	AT1G29910.1	18642946
AT1G74890.1	Bra030181.1-P	AT1G29910.1	18642946
AT1G74890.1	Bra030182.1-P	AT1G29910.1	18642946
AT1G74890.1	Bra010807.1-P	AT1G29920.1	18642946
AT1G74890.1	Bra021909.1-P	AT1G29920.1	18642946
AT1G74890.1	Bra022976.1-P	AT1G29920.1	18642946
AT1G74890.1	Bra030181.1-P	AT1G29920.1	18642946
AT1G74890.1	Bra030182.1-P	AT1G29920.1	18642946
AT1G74890.1	Bra023252.1-P	AT1G32230.1	19548978
AT1G74890.1	Bra035511.1-P	AT1G32230.1	19548978
AT1G74890.1	Bra009364.1-P	AT5G08720.1	18642946
AT1G74890.1	Bra033666.1-P	AT5G43170.1	18642946

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45402	Canola	cytosol, golgi, peroxisome	99.46	100.0
CDX73122	Canola	cytosol, golgi, nucleus	92.43	96.61
AT1G74890.1	Thale cress	nucleus	83.24	74.76
Bra003782.1-P	Field mustard	cytosol	76.76	72.08
Bra018084.1-P	Field mustard	cytosol, nucleus, plastid	62.16	64.25
Bra025708.1-P	Field mustard	nucleus	73.51	63.85
Bra033773.1-P	Field mustard	nucleus	61.08	62.78
Bra016526.1-P	Field mustard	cytosol	69.73	62.32
Solyc03g113720.2.1	Tomato	nucleus	60.54	57.44
PGSC0003DMT400063187	Potato	cytosol	60.54	56.0
Bra014695.1-P	Field mustard	cytosol	37.3	54.33
KRH03376	Soybean	nucleus	60.54	54.11
Bra010132.1-P	Field mustard	nucleus	55.14	53.68
KRH63457	Soybean	cytosol	58.38	52.94
KRH57009	Soybean	nucleus	60.0	52.61
KRH54462	Soybean	cytosol	57.84	52.45
Bra000199.1-P	Field mustard	cytosol	45.41	52.17
Bra019524.1-P	Field mustard	cytosol	36.22	50.0
Bra007242.1-P	Field mustard	cytosol, nucleus, plastid	42.7	46.75
VIT_17s0000g07580.t01	Wine grape	cytosol, nucleus, plastid	60.54	43.41
Bra027829.1-P	Field mustard	nucleus	51.89	42.48
Bra004615.1-P	Field mustard	nucleus	45.95	39.72
Bra018439.1-P	Field mustard	nucleus	52.43	38.65
Bra019932.1-P	Field mustard	nucleus	52.43	38.34
Bra031714.1-P	Field mustard	nucleus	52.97	37.55
Bra036963.1-P	Field mustard	nucleus	52.97	37.55
Bra000224.1-P	Field mustard	nucleus	43.78	37.5
Bra016943.1-P	Field mustard	cytosol	44.32	36.94
Bra007295.1-P	Field mustard	cytosol	46.49	36.44
Bra003265.1-P	Field mustard	cytosol	45.41	35.0
Bra014649.1-P	Field mustard	nucleus	43.24	34.19

Protein Annotations

MapMan:11.4.2.5	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra015885	EnsemblPlants:Bra015885.1	EnsemblPlants:Bra015885.1-P	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001789	UniProt:M4DHA8
PFAM:PF00072	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF17	SMART:SM00448	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TMHMM:TMhelix	UniParc:UPI0002541EF0	SEG:seg	:	:

Description

AT1G74890 (E=2e-062) ARR15 | ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator

Coordinates

chrA07:-:20362274..20363368

Molecular Weight (calculated)

20557.3 Da

IEP (calculated)

6.007

GRAVY (calculated)

0.152

Length

185 amino acids

Sequence
(BLAST)

001: MALGDLSSSS SSTSELHVLA VDDSIVDRKV IERLLRISAC KVTTVESGTR ALQYLGLDGD KGSSGLKDLK VNLIVTDYSM PGLTGYELLK KIKESSAFRE
101: IPVVIMSSEN IQPRIEQCMT EGAEDFLLKP VKLADVKRLK ELIMRGGEAE QEKTSNLISP KRILQNNIFF FIIFFIITIT IIFIV

Best Arabidopsis Sequence Match ( AT1G74890.1 )
(BLAST)

001: MALRDLSSSL SSSSSPELHV LAVDDSFVDR KVIERLLKIS ACKVTTVESG TRALQYLGLD GDNGSSGLKD LKVNLIVTDY SMPGLTGYEL LKKIKESSAL
101: REIPVVIMSS ENIQPRIEQC MIEGAEEFLL KPVKLADVKR LKELIMRGGE AEEGKTKKLS PKRILQNDID SSPSSSSTSS SSSSHDVSSL DDDTPSSKRI
201: KLESRG

Arabidopsis Description

ARR15Two-component response regulator ARR15 [Source:UniProtKB/Swiss-Prot;Acc:Q7G8V2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.