Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra003782.1-P | |
| Bra010132.1-P | |
| Bra015885.1-P | |
| Bra016526.1-P | |
| Bra025708.1-P |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22361 | Canola | nucleus | 96.76 | 96.76 |
| CDY30794 | Canola | nucleus | 94.05 | 92.06 |
| AT5G43170.1 | Thale cress | nucleus | 72.43 | 69.43 |
| Bra032845.1-P | Field mustard | nucleus | 75.14 | 60.7 |
| Bra010922.1-P | Field mustard | nucleus | 75.14 | 59.66 |
| Bra009464.1-P | Field mustard | plastid | 70.81 | 57.46 |
| KRH15443 | Soybean | nucleus | 55.14 | 43.78 |
| KRH05601 | Soybean | nucleus | 56.76 | 43.75 |
| Bra012914.1-P | Field mustard | nucleus | 44.86 | 38.97 |
| Bra029985.1-P | Field mustard | nucleus | 45.41 | 38.01 |
| Bra037845.1-P | Field mustard | nucleus | 46.49 | 37.23 |
| Bra001752.1-P | Field mustard | nucleus | 52.97 | 36.7 |
| Bra038219.1-P | Field mustard | nucleus | 51.89 | 36.36 |
| Bra031834.1-P | Field mustard | nucleus | 45.95 | 36.17 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 42.7 | 35.91 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 42.16 | 35.62 |
| Bra022436.1-P | Field mustard | nucleus | 51.35 | 35.58 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 38.92 | 35.29 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 41.08 | 34.7 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 44.86 | 34.44 |
| Bra024448.1-P | Field mustard | nucleus | 44.86 | 34.44 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 43.78 | 34.03 |
| Os12t0583700-00 | Rice | nucleus | 45.41 | 34.01 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 43.78 | 33.89 |
| PGSC0003DMT400084751 | Potato | nucleus | 47.03 | 33.21 |
| Os03t0610400-01 | Rice | nucleus | 42.16 | 32.77 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 42.7 | 31.98 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 44.32 | 29.71 |
| Solyc01g107170.2.1 | Tomato | nucleus | 47.03 | 28.06 |
| Zm00001d030858_P001 | Maize | nucleus | 41.08 | 27.44 |
| EES16240 | Sorghum | nucleus | 42.7 | 27.24 |
| Bra014483.1-P | Field mustard | nucleus | 30.81 | 22.35 |
| Bra040325.1-P | Field mustard | nucleus | 33.51 | 22.06 |
| Bra003422.1-P | Field mustard | nucleus | 34.59 | 21.55 |
| Bra007545.1-P | Field mustard | nucleus | 33.51 | 20.88 |
| Bra000372.1-P | Field mustard | mitochondrion, nucleus | 34.59 | 20.65 |
| Bra029315.1-P | Field mustard | nucleus | 23.24 | 18.45 |
| Bra012953.1-P | Field mustard | plastid | 26.49 | 17.82 |
| Bra018817.1-P | Field mustard | nucleus | 35.68 | 17.69 |
| Bra040741.1-P | Field mustard | nucleus | 18.38 | 16.27 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 17.84 | 15.42 |
| Bra038491.1-P | Field mustard | nucleus | 21.08 | 10.03 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EnsemblPlantsGene:Bra033666 | EnsemblPlants:Bra033666.1 | EnsemblPlants:Bra033666.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0042538 |
| GO:GO:0043565 | GO:GO:0045892 | InterPro:IPR013087 | UniProt:M4EXX7 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF319 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000253F7A3 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | : | : | : | : |
Description
AT5G43170 (E=7e-062) AZF3 | AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding
Coordinates
chrA06:+:25732392..25732949
Molecular Weight (calculated)
20400.2 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.535
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALNSPR IASPVPTLFE EHWTKGKRSK RSRSDHLHRL SEEEYLAFCL MLLARDGDRH HVEEEKTVYK CGVCDKVFLS YQALGGHKAS HRNLSSGGDV
101: KPTTPSAVKS HVCSICHKSF ATGQALGGHK RCHYDGSSSV VSNYEGVGST SHVSRGLDLN ITPINEFSPD DEVMSPLPSK KLRLK
101: KPTTPSAVKS HVCSICHKSF ATGQALGGHK RCHYDGSSSV VSNYEGVGST SHVSRGLDLN ITPINEFSPD DEVMSPLPSK KLRLK
001: MALEALNSPR LVEDPLRFNG VEQWTKCKKR SKRSRSDLHH NHRLTEEEYL AFCLMLLARD GGDLDSVTVA EKPSYKCGVC YKTFSSYQAL GGHKASHRSL
101: YGGGENDKST PSTAVKSHVC SVCGKSFATG QALGGHKRCH YDGGVSNSEG VGSTSHVSSS SHRGFDLNII PVQGFSPDDE VMSPMATKKP RLK
101: YGGGENDKST PSTAVKSHVC SVCGKSFATG QALGGHKRCH YDGGVSNSEG VGSTSHVSSS SHRGFDLNII PVQGFSPDDE VMSPMATKKP RLK
Arabidopsis Description
AZF3Zinc finger protein AZF3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSW0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.