Factsheet for Bra022436.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46162	Canola	nucleus	97.38	97.38
CDX99202	Canola	nucleus	94.38	94.74
Bra001752.1-P	Field mustard	nucleus	78.65	78.65
Bra038219.1-P	Field mustard	nucleus	76.78	77.65
AT3G19580.1	Thale cress	nucleus	76.78	75.09
Bra033666.1-P	Field mustard	nucleus	35.58	51.35
HORVU4Hr1G013460.1	Barley	nucleus	38.95	47.49
TraesCS4A01G236000.1	Wheat	nucleus	35.96	47.06
TraesCS4D01G077900.1	Wheat	nucleus	37.83	46.12
TraesCS4B01G079000.1	Wheat	nucleus	37.45	45.45
Bra032845.1-P	Field mustard	nucleus	37.83	44.1
Bra010922.1-P	Field mustard	nucleus	38.2	43.78
TraesCS5A01G070600.1	Wheat	nucleus	38.95	43.15
TraesCS5B01G076400.1	Wheat	nucleus	38.58	43.1
Bra029985.1-P	Field mustard	nucleus	35.58	42.99
Bra009464.1-P	Field mustard	plastid	36.7	42.98
Bra012914.1-P	Field mustard	nucleus	34.08	42.72
TraesCS5D01G082700.1	Wheat	nucleus	37.83	42.44
Os03t0610400-01	Rice	nucleus	36.7	41.18
Os12t0583700-00	Rice	nucleus	37.45	40.49
Bra037845.1-P	Field mustard	nucleus	34.46	39.83
Bra031834.1-P	Field mustard	nucleus	34.46	39.15
Bra024448.1-P	Field mustard	nucleus	34.83	38.59
GSMUA_Achr5P08730_001	Banana	nucleus	34.83	37.65
GSMUA_Achr6P24730_001	Banana	nucleus	33.71	32.61
Zm00001d030858_P001	Maize	nucleus	32.58	31.41
EES16240	Sorghum	nucleus	33.71	31.03
Bra040325.1-P	Field mustard	nucleus	27.72	26.33
Bra007545.1-P	Field mustard	nucleus	28.09	25.25
Bra014483.1-P	Field mustard	nucleus	23.97	25.1
Bra003422.1-P	Field mustard	nucleus	26.59	23.91
Bra000372.1-P	Field mustard	mitochondrion, nucleus	26.97	23.23
Bra018817.1-P	Field mustard	nucleus	29.21	20.91
Bra012953.1-P	Field mustard	plastid	18.35	17.82
Bra029315.1-P	Field mustard	nucleus	15.36	17.6
Bra040741.1-P	Field mustard	nucleus	13.11	16.75
Bra012701.1-P	Field mustard	nucleus, plastid	12.73	15.89
Bra038491.1-P	Field mustard	nucleus	14.98	10.28

Protein Annotations

EnsemblPlants:Bra022436.1	EnsemblPlants:Bra022436.1-P	EnsemblPlantsGene:Bra022436	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF263
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002547DB3	UniProt:M4E0Y9	MapMan:15.5.15	:	:	:

Description

AT3G19580 (E=5e-053) AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding

Coordinates

chrA05:+:17704957..17705964

Molecular Weight (calculated)

29255.5 Da

IEP (calculated)

8.693

GRAVY (calculated)

-0.710

Length

267 amino acids

Sequence
(BLAST)

001: MALEAMNCPT NSSSFTARKD RNEPTDDLTN DTVFMEPWMK RKRSKRQRSR SPSSSPPRSR PKSQIQDLAE EEYLALCLLM LANDHHQPKT QPPQESTTKL
101: SHKCSVCGKA FPSYQALGGH KASHRIKPQT TTADDDSTTP TIAVAHPTST AIAPSGKIHE CSICHKVFPT GQALGGHKRC HYEGTIGGGG GSKSVSQSGS
201: VTSTVSEERS NRVFIDLNLP ALPELSLHHH NTVVDEEIQS PLTGKKPLLS TDHDKVIIKK EDFSLRI

Best Arabidopsis Sequence Match ( AT3G19580.2 )
(BLAST)

001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI

Arabidopsis Description

AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.