Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G082700.1 | Wheat | nucleus | 93.72 | 94.12 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 93.31 | 92.53 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 55.65 | 60.45 |
| Os12t0583700-00 | Rice | nucleus | 56.07 | 54.25 |
| CDY02102 | Canola | nucleus | 30.96 | 46.84 |
| CDY22361 | Canola | nucleus | 34.73 | 44.86 |
| CDY23027 | Canola | nucleus | 31.8 | 44.71 |
| CDX81313 | Canola | nucleus | 34.73 | 44.62 |
| Bra033666.1-P | Field mustard | nucleus | 33.89 | 43.78 |
| KRH61394 | Soybean | nucleus | 42.68 | 43.78 |
| PGSC0003DMT400091896 | Potato | nucleus | 34.73 | 43.68 |
| CDY30794 | Canola | nucleus | 34.31 | 43.39 |
| PGSC0003DMT400030168 | Potato | nucleus | 37.66 | 43.06 |
| KRH52082 | Soybean | nucleus | 41.84 | 42.92 |
| Zm00001d030858_P001 | Maize | nucleus | 49.37 | 42.6 |
| VIT_03s0091g00690.t01 | Wine grape | nucleus | 41.84 | 42.55 |
| VIT_18s0001g09230.t01 | Wine grape | nucleus | 41.0 | 42.06 |
| KRH15443 | Soybean | nucleus | 40.59 | 41.63 |
| Solyc12g088390.1.1 | Tomato | nucleus | 34.73 | 41.5 |
| EES16240 | Sorghum | nucleus | 50.21 | 41.38 |
| KRH05601 | Soybean | nucleus | 41.42 | 41.25 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 40.17 | 41.2 |
| CDY43576 | Canola | nucleus | 35.98 | 41.15 |
| AT5G43170.1 | Thale cress | nucleus | 33.05 | 40.93 |
| AT3G49930.1 | Thale cress | nucleus | 36.4 | 40.47 |
| Bra012914.1-P | Field mustard | nucleus | 35.56 | 39.91 |
| Bra029985.1-P | Field mustard | nucleus | 36.82 | 39.82 |
| CDX68558 | Canola | nucleus | 36.82 | 39.64 |
| CDY18661 | Canola | nucleus | 34.31 | 39.61 |
| CDX68559 | Canola | nucleus | 37.24 | 39.56 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 36.4 | 39.55 |
| CDX83103 | Canola | nucleus | 36.4 | 39.19 |
| CDY37851 | Canola | nucleus | 35.15 | 39.07 |
| TraesCS5B01G406000.1 | Wheat | nucleus | 42.26 | 38.7 |
| Bra022436.1-P | Field mustard | nucleus | 43.1 | 38.58 |
| CDY03945 | Canola | nucleus | 37.24 | 38.53 |
| CDX84907 | Canola | nucleus | 36.82 | 38.43 |
| CDX99202 | Canola | nucleus | 42.68 | 38.35 |
| Bra009464.1-P | Field mustard | plastid | 36.4 | 38.16 |
| CDX70236 | Canola | nucleus, plastid | 36.4 | 38.16 |
| KRH35675 | Soybean | nucleus | 41.0 | 38.13 |
| CDY27629 | Canola | nucleus | 36.4 | 37.99 |
| Bra032845.1-P | Field mustard | nucleus | 36.4 | 37.99 |
| AT1G27730.1 | Thale cress | nucleus | 35.98 | 37.89 |
| PGSC0003DMT400055391 | Potato | nucleus | 30.54 | 37.82 |
| Bra010922.1-P | Field mustard | nucleus | 36.82 | 37.77 |
| CDY11770 | Canola | nucleus | 36.82 | 37.77 |
| CDX90105 | Canola | nucleus | 36.82 | 37.77 |
| CDY51312 | Canola | nucleus | 34.73 | 37.73 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 41.0 | 37.69 |
| KRG91102 | Soybean | nucleus | 41.0 | 37.69 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.91 | 37.65 |
| CDX95435 | Canola | nucleus | 41.0 | 37.55 |
| CDY46162 | Canola | nucleus | 41.42 | 37.08 |
| CDY65161 | Canola | nucleus | 41.0 | 36.57 |
| CDX82290 | Canola | nucleus | 41.0 | 36.43 |
| Bra038219.1-P | Field mustard | nucleus | 40.17 | 36.36 |
| Bra001752.1-P | Field mustard | nucleus | 40.59 | 36.33 |
| TraesCS7B01G065700.1 | Wheat | nucleus | 32.22 | 36.15 |
| CDY42192 | Canola | nucleus | 39.75 | 35.98 |
| Bra037845.1-P | Field mustard | nucleus | 34.73 | 35.93 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 34.73 | 35.93 |
| Bra031834.1-P | Field mustard | nucleus | 35.15 | 35.74 |
| AT5G04340.1 | Thale cress | nucleus | 35.56 | 35.71 |
| TraesCS2B01G105900.1 | Wheat | nucleus | 29.71 | 35.5 |
| Bra024448.1-P | Field mustard | nucleus | 35.56 | 35.27 |
| CDY08718 | Canola | nucleus | 35.56 | 35.27 |
| AT3G19580.1 | Thale cress | nucleus | 40.17 | 35.16 |
| AT5G67450.1 | Thale cress | nucleus | 35.56 | 34.69 |
| CDY36493 | Canola | nucleus | 34.73 | 34.44 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 39.33 | 34.06 |
| PGSC0003DMT400084751 | Potato | nucleus | 36.4 | 33.21 |
| PGSC0003DMT400040388 | Potato | cytosol | 29.29 | 33.02 |
| PGSC0003DMT400072661 | Potato | nucleus | 35.56 | 32.82 |
| PGSC0003DMT400085102 | Potato | nucleus | 29.71 | 31.56 |
| PGSC0003DMT400006126 | Potato | nucleus | 37.66 | 31.25 |
| PGSC0003DMT400095976 | Potato | nucleus | 29.29 | 29.41 |
| Solyc01g107170.2.1 | Tomato | nucleus | 36.82 | 28.39 |
| PGSC0003DMT400024799 | Potato | cytosol | 22.18 | 27.18 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 28.03 | 21.34 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 26.36 | 20.39 |
| TraesCS1B01G225500.1 | Wheat | nucleus | 27.2 | 19.06 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G076400.1 | EnsemblPlantsGene:TraesCS5B01G076400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 | : |
Description
No Description!
Coordinates
chr5B:+:91532580..91533677
Molecular Weight (calculated)
24426.8 Da
IEP (calculated)
7.504
GRAVY (calculated)
-0.283
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAVLEAA TMIPSPPSKE MEASSSTSEE ASALLGQAEG WSKRKRSRRQ RALDPSEEEY LALCLLMLAH GHRDSAPAAA PEQQHGCSVC GKVFASYQAL
101: GGHKASHRKP TAAPAGAEDQ KPLAAVAAAS SSGSGEAAVS AGGGKVHECN VCRKTFPTGQ ALGGHKRCHY DGTIGSAAAG PTQKLAAKAA AASATAASQG
201: FDLNLPALPD IPERCAVTED GEEVLSPASF KKPRLMLAA
101: GGHKASHRKP TAAPAGAEDQ KPLAAVAAAS SSGSGEAAVS AGGGKVHECN VCRKTFPTGQ ALGGHKRCHY DGTIGSAAAG PTQKLAAKAA AASATAASQG
201: FDLNLPALPD IPERCAVTED GEEVLSPASF KKPRLMLAA
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.