Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G211800.1 | Wheat | nucleus | 92.38 | 94.31 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 94.13 | 94.13 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 91.79 | 91.25 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 71.85 | 68.25 |
| Zm00001d047102_P001 | Maize | nucleus | 66.86 | 67.06 |
| Zm00001d029917_P001 | Maize | nucleus | 66.28 | 66.28 |
| EER91950 | Sorghum | mitochondrion, plastid | 65.98 | 58.29 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 42.82 | 53.48 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 42.82 | 52.71 |
| KRH57408 | Soybean | nucleus | 33.72 | 43.4 |
| TraesCS6B01G276100.1 | Wheat | nucleus | 39.3 | 42.68 |
| KRH04135 | Soybean | nucleus | 31.96 | 41.44 |
| TraesCS2B01G431800.1 | Wheat | nucleus | 36.95 | 40.78 |
| KRH28087 | Soybean | nucleus | 33.72 | 39.93 |
| KRH77360 | Soybean | nucleus | 33.43 | 38.26 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 35.48 | 37.46 |
| CDY40527 | Canola | nucleus | 20.23 | 35.57 |
| CDY09671 | Canola | nucleus | 20.82 | 35.5 |
| PGSC0003DMT400030986 | Potato | nucleus | 31.09 | 34.75 |
| Solyc06g060740.1.1 | Tomato | nucleus | 31.09 | 34.64 |
| CDY32274 | Canola | nucleus | 19.94 | 34.52 |
| CDY69391 | Canola | nucleus | 21.41 | 34.11 |
| PGSC0003DMT400012154 | Potato | nucleus | 29.33 | 33.56 |
| AT4G16610.1 | Thale cress | nucleus | 19.94 | 33.33 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 20.82 | 33.18 |
| CDY53641 | Canola | nucleus | 20.23 | 33.01 |
| CDY50848 | Canola | nucleus | 20.23 | 33.01 |
| Bra040741.1-P | Field mustard | nucleus | 20.23 | 33.01 |
| Solyc08g078590.1.1 | Tomato | nucleus | 26.69 | 32.38 |
| KRH39952 | Soybean | nucleus | 27.27 | 30.39 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 18.77 | 29.09 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 19.06 | 27.2 |
| TraesCS2B01G212900.1 | Wheat | nucleus | 17.3 | 26.82 |
| TraesCS7B01G065700.1 | Wheat | nucleus | 14.37 | 23.0 |
| TraesCS5B01G406000.1 | Wheat | nucleus | 17.3 | 22.61 |
| TraesCS2B01G105900.1 | Wheat | nucleus | 12.32 | 21.0 |
| Bra038491.1-P | Field mustard | nucleus | 20.82 | 18.25 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G225500.1 | EnsemblPlantsGene:TraesCS1B01G225500 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF261 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1B:-:404897529..404898554
Molecular Weight (calculated)
36193.1 Da
IEP (calculated)
7.893
GRAVY (calculated)
-0.578
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRHTCKLCF RRFQNGRALG GHMRSHVMAA AAAAPYSTPP PQQLSPPLSL ASTSSTDTDG KPAQPKRLSW ALREDPARSC KVGAPEFSGG CFGGITAAAG
101: ESSVVQDGES DTESPRGGAG FAVSRRRSKR ARRRAPPPVP DPEPASTVSD STQEEDVAMS LVMLSQDSWT RSRSEPEPRW ASEAEQNNDG AKVFDEDEDG
201: RNVVGEAYYV ETAAAHVHPR ARHQCGACKK VFRSYQALGG HRASVKKGKG GCVPPPAGKA CRADAPIVHE CPFCFRVFGS GQALGGHKRA HMPFGGALAA
301: SSPPAKCGDS FGSFDLNVPA AFDDDFELSA VYDAEFGSAR Q
101: ESSVVQDGES DTESPRGGAG FAVSRRRSKR ARRRAPPPVP DPEPASTVSD STQEEDVAMS LVMLSQDSWT RSRSEPEPRW ASEAEQNNDG AKVFDEDEDG
201: RNVVGEAYYV ETAAAHVHPR ARHQCGACKK VFRSYQALGG HRASVKKGKG GCVPPPAGKA CRADAPIVHE CPFCFRVFGS GQALGGHKRA HMPFGGALAA
301: SSPPAKCGDS FGSFDLNVPA AFDDDFELSA VYDAEFGSAR Q
001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
Arabidopsis Description
ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.