Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G211800.1 | Wheat | nucleus | 95.01 | 97.01 |
| TraesCS1B01G225500.1 | Wheat | nucleus | 94.13 | 94.13 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 93.55 | 93.0 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 73.61 | 69.92 |
| Zm00001d047102_P001 | Maize | nucleus | 67.16 | 67.35 |
| Zm00001d029917_P001 | Maize | nucleus | 66.86 | 66.86 |
| EER91950 | Sorghum | mitochondrion, plastid | 66.86 | 59.07 |
| GSMUA_Achr4P26920_001 | Banana | mitochondrion | 43.11 | 53.85 |
| GSMUA_Achr5P15450_001 | Banana | mitochondrion | 43.11 | 53.07 |
| TraesCS6D01G230800.1 | Wheat | nucleus | 39.88 | 43.17 |
| KRH57408 | Soybean | nucleus | 33.43 | 43.02 |
| KRH04135 | Soybean | nucleus | 32.26 | 41.83 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 37.54 | 41.69 |
| KRH28087 | Soybean | nucleus | 34.02 | 40.28 |
| KRH77360 | Soybean | nucleus | 33.72 | 38.59 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 34.9 | 36.84 |
| CDY40527 | Canola | nucleus | 20.23 | 35.57 |
| CDY09671 | Canola | nucleus | 20.82 | 35.5 |
| CDY32274 | Canola | nucleus | 19.94 | 34.52 |
| PGSC0003DMT400030986 | Potato | nucleus | 30.79 | 34.43 |
| Solyc06g060740.1.1 | Tomato | nucleus | 30.79 | 34.31 |
| CDY69391 | Canola | nucleus | 21.41 | 34.11 |
| PGSC0003DMT400012154 | Potato | nucleus | 29.33 | 33.56 |
| AT4G16610.1 | Thale cress | nucleus | 19.94 | 33.33 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 20.82 | 33.18 |
| CDY53641 | Canola | nucleus | 20.23 | 33.01 |
| CDY50848 | Canola | nucleus | 20.23 | 33.01 |
| Bra040741.1-P | Field mustard | nucleus | 20.23 | 33.01 |
| Solyc08g078590.1.1 | Tomato | nucleus | 26.69 | 32.38 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 19.94 | 31.05 |
| KRH39952 | Soybean | nucleus | 27.27 | 30.39 |
| TraesCS2D01G193900.1 | Wheat | nucleus | 17.6 | 27.52 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 18.48 | 26.47 |
| TraesCS7D01G161800.1 | Wheat | nucleus | 14.08 | 23.08 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 11.73 | 20.41 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 18.48 | 18.92 |
| Bra038491.1-P | Field mustard | nucleus | 20.82 | 18.25 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G214900.1 | EnsemblPlantsGene:TraesCS1D01G214900 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF261 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr1D:-:300025031..300026314
Molecular Weight (calculated)
36317.1 Da
IEP (calculated)
7.480
GRAVY (calculated)
-0.623
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRHTCKLCF RRFQNGRALG GHMRSHVMAA AAAAAYSTPP PQQQSPPLSL ASTSSTDTDG KPAQPKRLSW VLREDPERSC KVGAAEFSGG CFGGVTAAAG
101: ESSVVQDGES DTESPRGGAG FAVSRRRSKR ARRRAPPPVP DPEPASTVSD STQEEDVAMS LVMLSRDSWT RSRSEPEPRW ASEAEQNNDG ANVFDEDEDG
201: RDVAGEAYYA EATPVLVHPR ARHQCGACKK VFRSYQALGG HRASVKKGKG GCVPPPAGKA HRADAPIVHE CPFCFRVFGS GQALGGHKRA HMPFGGALAP
301: SPPPAKCGDS FGSFDLNVPA AFDDDFELSA VYDAEFGSTR Q
101: ESSVVQDGES DTESPRGGAG FAVSRRRSKR ARRRAPPPVP DPEPASTVSD STQEEDVAMS LVMLSRDSWT RSRSEPEPRW ASEAEQNNDG ANVFDEDEDG
201: RDVAGEAYYA EATPVLVHPR ARHQCGACKK VFRSYQALGG HRASVKKGKG GCVPPPAGKA HRADAPIVHE CPFCFRVFGS GQALGGHKRA HMPFGGALAP
301: SPPPAKCGDS FGSFDLNVPA AFDDDFELSA VYDAEFGSTR Q
001: MESYKCRVCF KSFVNGKALG GHMRSHMSNS HEEEQRPSQL SYETESDVSS SDPKFAFTSS VLLEDGESES ESSRNVINLT RKRSKRTRKL DSFVTKKVKT
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
101: SQLGYKPESD QEPPHSSASD TTTEEDLAFC LMMLSRDKWK KNKSNKEVVE EIETEEESEG YNKINRATTK GRYKCETCGK VFKSYQALGG HRASHKKNRV
201: SNNKTEQRSE TEYDNVVVVA KRIHECPICL RVFASGQALG GHKRSHGVGN LSVNQQRRVH RNESVKQRMI DLNLPAPTEE DEVSVVFQ
Arabidopsis Description
ZAT9Zinc finger protein ZAT9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M202]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.