Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G276100.1 | Wheat | nucleus | 96.83 | 97.13 |
| TraesCS6A01G248700.1 | Wheat | nucleus | 96.83 | 97.13 |
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 93.33 | 93.93 |
| HORVU0Hr1G030680.1 | Barley | nucleus | 93.33 | 93.93 |
| Os02t0659500-01 | Rice | mitochondrion | 73.97 | 68.33 |
| OQU85696 | Sorghum | mitochondrion | 69.52 | 64.99 |
| TraesCS2D01G410300.1 | Wheat | nucleus | 60.95 | 62.54 |
| Zm00001d017497_P001 | Maize | mitochondrion | 62.54 | 62.34 |
| Zm00001d051371_P001 | Maize | mitochondrion | 65.71 | 61.06 |
| GSMUA_Achr4P12160_001 | Banana | mitochondrion | 30.79 | 49.74 |
| KRH57408 | Soybean | nucleus | 34.6 | 41.13 |
| TraesCS1D01G214900.1 | Wheat | nucleus | 43.17 | 39.88 |
| KRH04135 | Soybean | nucleus | 33.02 | 39.54 |
| GSMUA_Achr4P05560_001 | Banana | nucleus | 27.62 | 37.83 |
| KRH28087 | Soybean | nucleus | 33.65 | 36.81 |
| AT4G16610.1 | Thale cress | nucleus | 23.81 | 36.76 |
| CDY09671 | Canola | nucleus | 23.17 | 36.5 |
| KRH77360 | Soybean | nucleus | 34.29 | 36.24 |
| CDY40527 | Canola | nucleus | 21.9 | 35.57 |
| CDY32274 | Canola | nucleus | 22.22 | 35.53 |
| Bra040741.1-P | Field mustard | nucleus | 23.49 | 35.41 |
| CDY53641 | Canola | nucleus | 23.49 | 35.41 |
| CDY50848 | Canola | nucleus | 23.17 | 34.93 |
| Bra012701.1-P | Field mustard | nucleus, plastid | 23.49 | 34.58 |
| CDY69391 | Canola | nucleus | 23.49 | 34.58 |
| VIT_00s0229g00050.t01 | Wine grape | nucleus | 35.24 | 34.37 |
| GSMUA_Achr1P24150_001 | Banana | mitochondrion | 28.57 | 33.83 |
| PGSC0003DMT400030986 | Potato | nucleus | 31.75 | 32.79 |
| Solyc06g060740.1.1 | Tomato | nucleus | 31.75 | 32.68 |
| PGSC0003DMT400012154 | Potato | nucleus | 29.52 | 31.21 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 20.95 | 30.14 |
| KRH39952 | Soybean | nucleus | 29.21 | 30.07 |
| Solyc08g078590.1.1 | Tomato | nucleus | 26.03 | 29.18 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 20.63 | 27.31 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 31.43 | 26.83 |
| TraesCS7D01G161800.1 | Wheat | nucleus | 16.83 | 25.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.41 | 25.44 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 14.92 | 23.98 |
| TraesCS2D01G193900.1 | Wheat | nucleus | 16.51 | 23.85 |
| Bra038491.1-P | Field mustard | nucleus | 24.76 | 20.05 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 18.73 | 17.72 |
| GSMUA_Achr7P04600_001 | Banana | nucleus | 18.73 | 16.34 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G230800.1 | EnsemblPlantsGene:TraesCS6D01G230800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF260 | PFAM:PF13894 | PFAM:PF13912 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | MapMan:15.5.15 |
Description
No Description!
Coordinates
chr6D:+:324248457..324249404
Molecular Weight (calculated)
33215.9 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.481
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKNTCKLCF RRFASPRALA GHMRSHSVRN LAAKQQISSA SSASTSFTAA ADDDVSFKKP LPIYALRENP KRSLRVTDVA FSDRESEAES TPPHPKRAHA
101: AAAGGETEPL SSVSDAATPE EDVALSLMML SRDSWPSMGH GYGDGDYSDD GSDGGYTLPA PDPAPVEKRT RFQCGACKKV FRSYQALGGH RASHVRGGRG
201: GCCAPPVAPP PPPPPQPLAP VTLMEREGDE DMDGKGSPRE CPYCYRVFAS GQALGGHKRS HVCSAAAAAA QAHAAAAPPD PIKAFGMIDL NIALPFEEVE
301: LSAVSDPRFS SNPGS
101: AAAGGETEPL SSVSDAATPE EDVALSLMML SRDSWPSMGH GYGDGDYSDD GSDGGYTLPA PDPAPVEKRT RFQCGACKKV FRSYQALGGH RASHVRGGRG
201: GCCAPPVAPP PPPPPQPLAP VTLMEREGDE DMDGKGSPRE CPYCYRVFAS GQALGGHKRS HVCSAAAAAA QAHAAAAPPD PIKAFGMIDL NIALPFEEVE
301: LSAVSDPRFS SNPGS
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.