CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017497_P001	Maize	mitochondrion	77.74	82.91
Zm00001d051371_P001	Maize	mitochondrion	78.04	77.58
TraesCS6A01G248700.1	Wheat	nucleus	65.58	70.38
HORVU0Hr1G030680.1	Barley	nucleus	65.28	70.29
HORVU6Hr1G063280.1	Barley	mitochondrion, nucleus, plastid	65.28	70.29
TraesCS6B01G276100.1	Wheat	nucleus	65.28	70.06
TraesCS6D01G230800.1	Wheat	nucleus	64.99	69.52
Os02t0659500-01	Rice	mitochondrion	64.69	63.93
EES11238	Sorghum	mitochondrion	54.6	55.26
GSMUA_Achr4P12160_001	Banana	mitochondrion	27.3	47.18
KRH57408	Soybean	nucleus	31.75	40.38
KRH28087	Soybean	nucleus	32.94	38.54
KRH04135	Soybean	nucleus	29.97	38.4
CDY09671	Canola	nucleus	21.96	37.0
KRH77360	Soybean	nucleus	32.64	36.91
AT4G16610.1	Thale cress	nucleus	22.26	36.76
CDY40527	Canola	nucleus	21.07	36.6
CDY32274	Canola	nucleus	21.07	36.04
CDY53641	Canola	nucleus	21.96	35.41
Bra040741.1-P	Field mustard	nucleus	21.96	35.41
Bra012701.1-P	Field mustard	nucleus, plastid	22.26	35.05
CDY69391	Canola	nucleus	22.26	35.05
GSMUA_Achr4P05560_001	Banana	nucleus	23.74	34.78
CDY50848	Canola	nucleus	21.36	34.45
VIT_00s0229g00050.t01	Wine grape	nucleus	32.94	34.37
GSMUA_Achr1P24150_001	Banana	mitochondrion	26.11	33.08
PGSC0003DMT400030986	Potato	nucleus	29.38	32.46
Solyc06g060740.1.1	Tomato	nucleus	29.38	32.35
PGSC0003DMT400012154	Potato	nucleus	28.49	32.21
EER91950	Sorghum	mitochondrion, plastid	36.5	31.87
Solyc08g078590.1.1	Tomato	nucleus	25.82	30.96
KRH39952	Soybean	nucleus	26.71	29.41
OQU90180	Sorghum	nucleus, plastid	18.4	25.94
GSMUA_AchrUn_...	Banana	mitochondrion	27.6	25.2
GSMUA_AchrUn_...	Banana	nucleus	16.02	23.68
EER92088	Sorghum	nucleus	16.32	23.31
EER92089	Sorghum	nucleus	13.65	22.22
EER97472	Sorghum	nucleus	12.76	21.83
EER92087	Sorghum	nucleus	16.32	21.48
EES16240	Sorghum	nucleus	18.1	21.03
EER90834	Sorghum	nucleus	17.21	19.93
Bra038491.1-P	Field mustard	nucleus	21.66	18.77
GSMUA_Achr7P04600_001	Banana	nucleus	16.02	14.96

Protein Annotations

EnsemblPlants:OQU85696	EnsemblPlantsGene:SORBI_3004G294100	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	ncoils:Coil	PANTHER:PTHR26374	PANTHER:PTHR26374:SF260	PFAM:PF13912
PFscan:PS50157	ProteinID:OQU85696	ProteinID:OQU85696.1	ScanProsite:PS00028	SEG:seg	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI000B8BAE39	UniProt:A0A1Z5RQM2	MapMan:15.5.15	:	:

Description

hypothetical protein

Coordinates

chr4:-:63406167..63407341

Molecular Weight (calculated)

34926.5 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.499

Length

337 amino acids

Sequence
(BLAST)

001: MAKNTCKLCS RRFASPRALA GHMRSHSIAR AQAAAAAAKQ QISSASSAST SFAAVADEDV GLKTPAASTY GLRENPKRSL RVADAAFSDR ESEAESTPPH
101: AKRVNAAPVW GEPEPASSLS EVSTPEDVAL SLMMLSRDSW PSAVLAEDDG SDDGSDDGYA PPPAPPLPRA PTPAPPPVEK RTQFMCVACK KVFRSYQALG
201: GHRASNVRGG RGGCCAPPPQ PPLSPLPEHR DGDGDEDEDM DMDAKQQPRE CPHCYRVFPS GQALGGHKRS HVCGAAAAAS SLAGTGTATA TASTTSPAAT
301: PPSPINNCPC MIDLNVAPPS EDAELSAVSD PHFNPGA

Best Arabidopsis Sequence Match ( AT2G45120.1 )
(BLAST)

001: MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW

Arabidopsis Description

ZAT4Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.