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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:
  • plastid 3
  • nucleus 4
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G030680.1 Barley nucleus 99.36 99.36
TraesCS6D01G230800.1 Wheat nucleus 93.93 93.33
TraesCS6B01G276100.1 Wheat nucleus 93.61 93.31
TraesCS6A01G248700.1 Wheat nucleus 93.29 92.99
Os02t0659500-01 Rice mitochondrion 74.12 68.04
OQU85696 Sorghum mitochondrion 70.29 65.28
HORVU2Hr1G097410.1 Barley nucleus 58.79 62.59
Zm00001d017497_P001 Maize mitochondrion 62.3 61.71
Zm00001d051371_P001 Maize mitochondrion 65.18 60.18
HORVU2Hr1G097440.1 Barley mitochondrion 38.02 54.59
GSMUA_Achr4P12160_001 Banana mitochondrion 31.31 50.26
KRH57408 Soybean nucleus 35.14 41.51
KRH04135 Soybean nucleus 33.55 39.92
HORVU1Hr1G054170.1 Barley nucleus 42.17 38.48
KRH28087 Soybean nucleus 34.19 37.15
CDY09671 Canola nucleus 23.64 37.0
GSMUA_Achr4P05560_001 Banana nucleus 27.16 36.96
KRH77360 Soybean nucleus 34.82 36.58
AT4G16610.1 Thale cress nucleus 23.64 36.27
CDY40527 Canola nucleus 22.36 36.08
CDY32274 Canola nucleus 22.68 36.04
CDY53641 Canola nucleus 23.96 35.89
Bra040741.1-P Field mustard nucleus 23.96 35.89
CDY50848 Canola nucleus 23.64 35.41
Bra012701.1-P Field mustard nucleus, plastid 23.96 35.05
CDY69391 Canola nucleus 23.96 35.05
GSMUA_Achr1P24150_001 Banana mitochondrion 29.39 34.59
VIT_00s0229g00050.t01 Wine grape nucleus 35.46 34.37
PGSC0003DMT400030986 Potato nucleus 31.95 32.79
Solyc06g060740.1.1 Tomato nucleus 31.95 32.68
PGSC0003DMT400012154 Potato nucleus 29.39 30.87
KRH39952 Soybean nucleus 30.03 30.72
HORVU4Hr1G013460.1 Barley nucleus 20.45 29.22
Solyc08g078590.1.1 Tomato nucleus 26.2 29.18
GSMUA_AchrUn_... Banana mitochondrion 31.63 26.83
GSMUA_AchrUn_... Banana nucleus 18.53 25.44
HORVU2Hr1G014870.1 Barley nucleus 15.97 23.15
Bra038491.1-P Field mustard nucleus 24.28 19.54
HORVU5Hr1G097500.3 Barley nucleus, plastid 17.89 18.12
GSMUA_Achr7P04600_001 Banana nucleus 18.85 16.34
HORVU3Hr1G028100.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 10.22 16.08
Protein Annotations
EnsemblPlants:HORVU6Hr1G063280.1EnsemblPlantsGene:HORVU6Hr1G063280GO:GO:0003674GO:GO:0003676GO:GO:0005488InterPro:IPR013087
InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR26374PANTHER:PTHR26374:SF260PFAM:PF13894PFAM:PF13912
PFscan:PS50157ScanProsite:PS00028SEG:segSMART:SM00355SUPFAM:SSF57667UniParc:UPI000296DD98
UniProt:M0Z9X3MapMan:15.5.15::::
Description
No Description!
Coordinates
chrchr6H:+:425786198..425787440
Molecular Weight (calculated)
33083.8 Da
IEP (calculated)
7.692
GRAVY (calculated)
-0.512
Length
313 amino acids
Sequence
(BLAST)
001: MAKNTCKLCF RRFASPRALA GHMRSHSVRN LAAKQQISSA SSASTSFTAA ADDDISFKKP LPIYALRENP KRSLRVTDVA FSDRESEAES TPPRAKRAHP
101: TAAGGETEPL SSVSDAATPE EDVALSLMML SRDSWPSSVG RGDGDYSDDG SDGGYTLPAP DPTPVEKRTR FQCGACKKVF RSYQALGGHR ASHVRGGRGG
201: CCAPPVAPPP PTPQPLPPLP LMERDGDEDM DGKGSPRECP YCYRVFPSGQ ALGGHKRSHV CSAAAAAAQA HAAAAPPDPI KAFGMIDLNI ALPCEDVELS
301: AVSDPRFSSN PAP
Best Arabidopsis Sequence Match ( AT1G02030.1 )
(BLAST)
001: MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI
101: GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK
201: KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID LNLPAPSEEE EMASSVF
Arabidopsis Description
ZAT1Zinc finger protein ZAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q39092]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.