Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G406000.1 | Wheat | nucleus | 78.64 | 93.1 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 84.14 | 78.79 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 83.82 | 77.78 |
| Os03t0764100-01 | Rice | nucleus | 66.02 | 75.84 |
| Zm00001d017695_P001 | Maize | extracellular | 29.77 | 66.19 |
| EER90834 | Sorghum | nucleus | 58.9 | 62.54 |
| Zm00001d013208_P001 | Maize | nucleus | 53.07 | 62.12 |
| Zm00001d034145_P001 | Maize | nucleus | 55.66 | 61.87 |
| Os08t0300366-00 | Rice | cytosol, nucleus, plastid | 22.01 | 47.89 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 31.72 | 44.75 |
| HORVU2Hr1G014870.1 | Barley | nucleus | 24.27 | 34.72 |
| Os07t0209600-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 26.54 | 27.7 |
| HORVU3Hr1G028100.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.15 | 26.63 |
| HORVU6Hr1G063280.1 | Barley | mitochondrion, nucleus, plastid | 18.12 | 17.89 |
| HORVU0Hr1G030680.1 | Barley | nucleus | 18.12 | 17.89 |
| HORVU2Hr1G097410.1 | Barley | nucleus | 16.83 | 17.69 |
| HORVU1Hr1G054170.1 | Barley | nucleus | 19.09 | 17.2 |
| HORVU2Hr1G097440.1 | Barley | mitochondrion | 8.09 | 11.47 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G097500.3 | EnsemblPlantsGene:HORVU5Hr1G097500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF218 | PFAM:PF13912 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000B47F8CE | UniProt:A0A287SFH5 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:604590982..604592669
Molecular Weight (calculated)
32638.5 Da
IEP (calculated)
9.683
GRAVY (calculated)
-0.454
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: TPHHTQLERG GRPSNHTLPP SQGRRRRGLR SRPALLSFVC ELATMSSSAM EALHALIPEQ QQQRQDWEAV SGATSGEESG HVLQGWAKRK RSRRHRSEEE
101: NLALCLLMLS RGGGGGGKQR VQAPQPESFA APAVAEFKCS VCGRSFGSYQ ALGGHKTSHR VKLPSPPADA AAAPLVSLPA VAAVLPSAEP ATSSTAASSD
201: GATNRVHRCS ICQKEFPTGQ ALGGHKRKHY DGGVGGVAAS STELLAAAAA ESEVGSTGNG SSAARAFDLN IPAVPEFVWR PCAKGKMMWE DDEEVQSPLA
301: FKKPRLLTA
101: NLALCLLMLS RGGGGGGKQR VQAPQPESFA APAVAEFKCS VCGRSFGSYQ ALGGHKTSHR VKLPSPPADA AAAPLVSLPA VAAVLPSAEP ATSSTAASSD
201: GATNRVHRCS ICQKEFPTGQ ALGGHKRKHY DGGVGGVAAS STELLAAAAA ESEVGSTGNG SSAARAFDLN IPAVPEFVWR PCAKGKMMWE DDEEVQSPLA
301: FKKPRLLTA
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.