CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034145_P001	Maize	nucleus	84.88	88.85
Zm00001d013208_P001	Maize	nucleus	72.51	79.92
Zm00001d017695_P001	Maize	extracellular	37.46	78.42
Os03t0764100-01	Rice	nucleus	65.98	71.38
TraesCS5B01G406000.1	Wheat	nucleus	62.89	70.11
HORVU5Hr1G097500.3	Barley	nucleus, plastid	62.54	58.9
TraesCS5A01G401200.1	Wheat	nucleus	62.54	55.15
TraesCS5D01G411400.1	Wheat	nucleus	62.2	54.35
Os08t0300366-00	Rice	cytosol, nucleus, plastid	25.43	52.11
EER97472	Sorghum	nucleus	24.05	35.53
EER92089	Sorghum	nucleus	24.4	34.3
EER92088	Sorghum	nucleus	27.49	33.9
OQU90180	Sorghum	nucleus, plastid	27.49	33.47
EES16240	Sorghum	nucleus	33.33	33.45
EER92087	Sorghum	nucleus	28.18	32.03
Os07t0209600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	27.84	27.36
EES11238	Sorghum	mitochondrion	21.99	19.22
OQU85696	Sorghum	mitochondrion	19.93	17.21
EER91950	Sorghum	mitochondrion, plastid	21.31	16.06

Protein Annotations

MapMan:15.5.15	EntrezGene:8086194	UniProt:C5X031	EnsemblPlants:EER90834	ProteinID:EER90834	ProteinID:EER90834.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR013087	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF218	SMART:SM00355	EnsemblPlantsGene:SORBI_3001G079500	SUPFAM:SSF57667	unigene:Sbi.15777	UniParc:UPI0001A822E8
RefSeq:XP_002463836.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:6104059..6105842

Molecular Weight (calculated)

30104.7 Da

IEP (calculated)

8.158

GRAVY (calculated)

-0.189

Length

291 amino acids

Sequence
(BLAST)

001: MSSMELLHAV IPEKQSEELM APAAATTTTT TSSSATAMSG DEVAHVPQGW AKKKRSRRQR SEEENLALCL LMLSRGGNHR VQAAPPLVPS AAPVAAEFRC
101: SVCGKSFSSY QALGGHKTSH RVKLPTPPAP PAAAVPAAVP LVEVEAPAPL TVIPPPPVEV VVREPATSST AASSDGAAAS SRVHRCSICH KEFPTGQALG
201: GHKRKHYDGG VGGSSAASTD VLAATAPAAT AETSEVGSSG NGSSAARAFD LNLPAVPEFV FRCGKAGKMW EEDEEVQSPL AFKKPRLLMT A

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.