CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

endoplasmic reticulum 3
plasma membrane 3
vacuole 3
golgi 3
extracellular 3
nucleus 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029586_P001	Maize	nucleus	73.73	74.68
TraesCS7D01G161800.1	Wheat	nucleus	53.81	61.06
TraesCS7B01G065700.1	Wheat	nucleus	54.66	60.56
TraesCS7A01G160700.2	Wheat	nucleus	54.24	59.53
EER92087	Sorghum	nucleus	64.41	59.38
Os03t0437200-01	Rice	cytosol, nucleus, vacuole	48.31	51.82
EER92089	Sorghum	nucleus	42.8	48.79
EER97472	Sorghum	nucleus	36.44	43.65
OQU90180	Sorghum	nucleus, plastid	28.81	28.45
EER90834	Sorghum	nucleus	33.9	27.49
EES16240	Sorghum	nucleus	30.93	25.17
CDY70162	Canola	nucleus	15.68	17.29
Bra029315.1-P	Field mustard	nucleus	16.53	16.74
CDY42873	Canola	nucleus	17.37	16.47
OQU85696	Sorghum	mitochondrion	23.31	16.32
Bra012953.1-P	Field mustard	plastid	18.64	16.0
CDY02142	Canola	nucleus	18.22	15.81
CDY23066	Canola	plastid	18.22	15.64
EES11238	Sorghum	mitochondrion	22.03	15.62
AT5G61470.1	Thale cress	nucleus	17.37	13.49
EER91950	Sorghum	mitochondrion, plastid	19.92	12.18

Protein Annotations

MapMan:15.5.15	UniProt:C5WVL9	EnsemblPlants:EER92088	ProteinID:EER92088	ProteinID:EER92088.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
InterPro:IPR013087	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF189
SMART:SM00355	EnsemblPlantsGene:SORBI_3001G330200	SUPFAM:SSF57667	UniParc:UPI0001A81FF4	RefSeq:XP_002465090.1	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:61780110..61781376

Molecular Weight (calculated)

24648.1 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.317

Length

236 amino acids

Sequence
(BLAST)

001: MVEHLVIDPT ALSLALPAAP APAPAPALSK EDYLAICLAA LAGTRKFGLG RDREQQQPTN KWCPTTLAPA QPQELRFRCA VCGKAFASYQ ALGGHKSSHR
101: KPPTPEQYAA AAAAQAAATG ADSDETASTG SADSGGGPHR CTICRRGFAT GQALGGHKRC HYWDGMSVSV SVSAASATVS ASAGTTGSSS GVTVRNFDLN
201: LTPLPEISNA GMTMRRWAEE EEVQSPLPIK KRRMSE

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.