Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029315.1-P | Field mustard | nucleus | 87.38 | 80.26 |
| CDY42873 | Canola | nucleus | 87.85 | 75.5 |
| CDY23066 | Canola | plastid | 58.41 | 45.45 |
| CDY02142 | Canola | nucleus | 57.48 | 45.22 |
| AT5G61470.1 | Thale cress | nucleus | 39.72 | 27.96 |
| CDY02102 | Canola | nucleus | 17.29 | 23.42 |
| CDY22361 | Canola | nucleus | 19.63 | 22.7 |
| CDX81313 | Canola | nucleus | 19.63 | 22.58 |
| CDY30794 | Canola | nucleus | 19.63 | 22.22 |
| CDY23027 | Canola | nucleus | 17.29 | 21.76 |
| Zm00001d029584_P001 | Maize | nucleus | 17.76 | 21.35 |
| Zm00001d047330_P001 | Maize | nucleus | 18.69 | 21.16 |
| TraesCS2A01G090200.1 | Wheat | nucleus | 18.69 | 20.41 |
| EER97472 | Sorghum | nucleus | 18.69 | 20.3 |
| TraesCS2D01G088100.1 | Wheat | nucleus | 18.22 | 19.9 |
| CDY18661 | Canola | nucleus | 19.16 | 19.81 |
| Zm00001d022002_P001 | Maize | nucleus | 18.22 | 19.7 |
| CDY43576 | Canola | nucleus | 19.16 | 19.62 |
| Os03t0437100-01 | Rice | nucleus | 18.22 | 19.5 |
| Os11t0340477-01 | Rice | nucleus | 18.22 | 19.5 |
| TraesCS2B01G105900.1 | Wheat | nucleus | 18.22 | 19.5 |
| EER92089 | Sorghum | nucleus | 18.69 | 19.32 |
| TraesCS7D01G161800.1 | Wheat | nucleus | 18.69 | 19.23 |
| CDY37851 | Canola | nucleus | 19.16 | 19.07 |
| CDX83103 | Canola | nucleus | 19.63 | 18.92 |
| TraesCS7B01G065700.1 | Wheat | nucleus | 18.69 | 18.78 |
| CDY51312 | Canola | nucleus | 19.16 | 18.64 |
| TraesCS7A01G160700.2 | Wheat | nucleus | 18.69 | 18.6 |
| CDX68558 | Canola | nucleus | 19.16 | 18.47 |
| CDY71582 | Canola | nucleus | 23.36 | 18.38 |
| Os07t0590100-01 | Rice | cytosol, nucleus | 17.29 | 18.32 |
| CDX68559 | Canola | nucleus | 19.16 | 18.22 |
| HORVU2Hr1G014870.1 | Barley | nucleus | 18.22 | 18.06 |
| CDX70236 | Canola | nucleus, plastid | 18.69 | 17.54 |
| CDX95629 | Canola | nucleus | 22.43 | 17.52 |
| CDX84907 | Canola | nucleus | 18.69 | 17.47 |
| CDY36493 | Canola | nucleus | 19.63 | 17.43 |
| CDY08718 | Canola | nucleus | 19.63 | 17.43 |
| CDY03945 | Canola | nucleus | 18.69 | 17.32 |
| CDX90105 | Canola | nucleus | 18.69 | 17.17 |
| CDY11770 | Canola | nucleus | 18.69 | 17.17 |
| CDX89061 | Canola | nucleus | 21.03 | 17.11 |
| CDY37027 | Canola | nucleus | 22.43 | 17.08 |
| CDY27629 | Canola | nucleus | 18.22 | 17.03 |
| CDY41155 | Canola | nucleus | 19.63 | 16.94 |
| CDX71799 | Canola | nucleus | 20.56 | 16.92 |
| CDY27394 | Canola | nucleus | 22.43 | 16.84 |
| CDX83402 | Canola | nucleus | 23.36 | 16.78 |
| CDY48363 | Canola | nucleus | 22.43 | 16.72 |
| Zm00001d029589_P001 | Maize | nucleus | 16.36 | 16.67 |
| Zm00001d047334_P001 | Maize | nucleus | 17.29 | 16.44 |
| CDX67836 | Canola | nucleus | 22.43 | 16.27 |
| Zm00001d029586_P001 | Maize | nucleus | 17.29 | 15.88 |
| EER92088 | Sorghum | nucleus | 17.29 | 15.68 |
| CDX99202 | Canola | nucleus | 19.16 | 15.41 |
| CDY46162 | Canola | nucleus | 19.16 | 15.36 |
| CDX95435 | Canola | nucleus | 18.69 | 15.33 |
| Zm00001d029587_P001 | Maize | nucleus | 17.76 | 15.32 |
| CDY65161 | Canola | nucleus | 19.16 | 15.3 |
| CDX82290 | Canola | nucleus | 19.16 | 15.24 |
| CDY42192 | Canola | nucleus | 18.22 | 14.77 |
| Os03t0437200-01 | Rice | cytosol, nucleus, vacuole | 14.95 | 14.55 |
| EER92087 | Sorghum | nucleus | 16.82 | 14.06 |
| HORVU3Hr1G028100.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 12.15 | 13.07 |
| CDY50966 | Canola | nucleus | 19.63 | 11.26 |
| CDY28108 | Canola | nucleus | 19.63 | 9.31 |
| CDY40527 | Canola | nucleus | 7.94 | 8.76 |
| CDY32274 | Canola | nucleus | 7.94 | 8.63 |
| CDY50848 | Canola | nucleus | 8.41 | 8.61 |
| CDY53641 | Canola | nucleus | 8.41 | 8.61 |
| CDY09671 | Canola | nucleus | 7.94 | 8.5 |
| CDY69391 | Canola | nucleus | 8.41 | 8.41 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078JX16 | UniProt:A0A078JX16 | EnsemblPlants:CDY70162 | ProteinID:CDY70162 |
| ProteinID:CDY70162.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00096829001 |
| InterPro:IPR013087 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF322 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE064C | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
BnaUnng03680DBnaUnng03680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX16]
Coordinates
chrLK041347:+:72..797
Molecular Weight (calculated)
24252.1 Da
IEP (calculated)
6.055
GRAVY (calculated)
-1.161
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSESASGST LPSLETSNNE TRCWGTRSKE RRRCTSNKRR GKDDPGLILV ALSKGQRPEN SQNWNAIDRL LAAPNGKEEY YETDLDSDDD NKEVKYKSVA
101: ELLTQNVETL TEDIDEDDED NDADGTNLVT REKKCKKEFI CDVCGKVFGS YQALGGHRTS HKCKRLKICD KNDQDRELVP NKKNDQDRRH QCGVCGREFE
201: SGQALGGHMK THYI
101: ELLTQNVETL TEDIDEDDED NDADGTNLVT REKKCKKEFI CDVCGKVFGS YQALGGHRTS HKCKRLKICD KNDQDRELVP NKKNDQDRRH QCGVCGREFE
201: SGQALGGHMK THYI
001: MYSLLKKTKI CQVCKKSFSN GKALGGHMRA HTLKFFPGSS SSTGSITPSL RSCNNLGASF RRPNETVLAR FVHTSEVVGG PKPDLNKEAE QRTTVKKKIV
101: VDLEEENSIE SESDITIEES ALCLLQMKDD NMSEYLQNLK SIDSLVSTRK RKDTENYIEI DSDENHEDSD DEYVVEDEDE DNEDDDVKSL TSDVENLIGD
201: SDEDDDDYGD ENAYYGGKRK RGKKQSKYTC DTCGKVLRSY QALGGHRTSH KYKRLKISDK NYFGEDGPIV RRQYECQICN RMFASGQALG GHKKIHYMFL
301: APAK
101: VDLEEENSIE SESDITIEES ALCLLQMKDD NMSEYLQNLK SIDSLVSTRK RKDTENYIEI DSDENHEDSD DEYVVEDEDE DNEDDDVKSL TSDVENLIGD
201: SDEDDDDYGD ENAYYGGKRK RGKKQSKYTC DTCGKVLRSY QALGGHRTSH KYKRLKISDK NYFGEDGPIV RRQYECQICN RMFASGQALG GHKKIHYMFL
301: APAK
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9FII6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.