Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37851 | Canola | nucleus | 94.74 | 92.09 |
| Bra031834.1-P | Field mustard | nucleus | 95.69 | 85.11 |
| CDX81313 | Canola | nucleus | 75.12 | 84.41 |
| CDY18661 | Canola | nucleus | 82.3 | 83.09 |
| CDY08718 | Canola | nucleus | 84.21 | 73.03 |
| CDY36493 | Canola | nucleus | 82.3 | 71.37 |
| AT5G67450.1 | Thale cress | nucleus | 81.82 | 69.8 |
| CDY02102 | Canola | nucleus | 50.72 | 67.09 |
| CDY23027 | Canola | nucleus | 50.24 | 61.76 |
| CDX68558 | Canola | nucleus | 64.11 | 60.36 |
| CDX83103 | Canola | nucleus | 63.64 | 59.91 |
| CDX68559 | Canola | nucleus | 64.11 | 59.56 |
| CDY22361 | Canola | nucleus | 40.19 | 45.41 |
| CDY30794 | Canola | nucleus | 39.71 | 43.92 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 46.41 | 41.63 |
| CDX90105 | Canola | nucleus | 44.98 | 40.34 |
| CDX84907 | Canola | nucleus | 44.02 | 40.17 |
| CDY11770 | Canola | nucleus | 44.5 | 39.91 |
| CDY03945 | Canola | nucleus | 44.02 | 39.83 |
| CDY27629 | Canola | nucleus | 43.54 | 39.74 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 38.76 | 39.71 |
| CDY51312 | Canola | nucleus | 40.19 | 38.18 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 40.19 | 38.18 |
| CDX70236 | Canola | nucleus, plastid | 40.67 | 37.28 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 38.76 | 36.99 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 38.76 | 36.99 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 41.15 | 35.98 |
| Os03t0610400-01 | Rice | nucleus | 40.67 | 35.71 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 41.15 | 35.68 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 39.71 | 34.87 |
| CDY65161 | Canola | nucleus | 44.5 | 34.7 |
| CDX82290 | Canola | nucleus | 44.02 | 34.2 |
| CDX95435 | Canola | nucleus | 42.58 | 34.1 |
| CDY42192 | Canola | nucleus | 43.06 | 34.09 |
| CDX99202 | Canola | nucleus | 43.06 | 33.83 |
| CDY46162 | Canola | nucleus | 42.11 | 32.96 |
| Os12t0583700-00 | Rice | nucleus | 37.32 | 31.58 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 35.89 | 30.36 |
| EES16240 | Sorghum | nucleus | 37.8 | 27.24 |
| Zm00001d030858_P001 | Maize | nucleus | 35.89 | 27.08 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 33.01 | 25.0 |
| CDX95629 | Canola | nucleus | 30.62 | 23.36 |
| CDX89061 | Canola | nucleus | 29.19 | 23.19 |
| CDY37027 | Canola | nucleus | 31.1 | 23.13 |
| CDY71582 | Canola | nucleus | 29.19 | 22.43 |
| CDY27394 | Canola | nucleus | 30.14 | 22.11 |
| CDY41155 | Canola | nucleus | 25.84 | 21.77 |
| CDX71799 | Canola | nucleus | 26.79 | 21.54 |
| CDX67836 | Canola | nucleus | 30.14 | 21.36 |
| CDX83402 | Canola | nucleus | 29.67 | 20.81 |
| CDY48363 | Canola | nucleus | 28.23 | 20.56 |
| CDY70162 | Canola | nucleus | 19.62 | 19.16 |
| CDY42873 | Canola | nucleus | 22.01 | 18.47 |
| CDY02142 | Canola | nucleus | 23.92 | 18.38 |
| CDY50966 | Canola | nucleus | 32.54 | 18.23 |
| CDY23066 | Canola | plastid | 23.92 | 18.18 |
| CDY40527 | Canola | nucleus | 15.79 | 17.01 |
| CDY32274 | Canola | nucleus | 15.31 | 16.24 |
| CDY09671 | Canola | nucleus | 15.31 | 16.0 |
| CDY53641 | Canola | nucleus | 15.79 | 15.79 |
| CDY50848 | Canola | nucleus | 15.79 | 15.79 |
| CDY69391 | Canola | nucleus | 15.79 | 15.42 |
| CDY28108 | Canola | nucleus | 31.58 | 14.63 |
Protein Annotations
| EnsemblPlants:CDY43576 | EnsemblPlantsGene:GSBRNA2T00076879001 | GO:A0A078I1C1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 |
| PFscan:PS50157 | ProteinID:CDY43576 | ProteinID:CDY43576.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EDDD6F | UniProt:A0A078I1C1 | MapMan:15.5.15 | : | : |
Description
BnaC02g16730DBnaC02g16730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1C1]
Coordinates
chrLK032561:-:200495..201202
Molecular Weight (calculated)
22699.4 Da
IEP (calculated)
9.049
GRAVY (calculated)
-0.771
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLNSPS SATASARPLL RYREEMEPEN LEQWAKRKRT KRQRFDQSRL DQETAPSEEE YLALCLLMLA RGSAVKSPLR PSPSSDHRGY KCTVCGKSFS
101: SYQALGGHKT SHRKPASNVN VPINQEPSNN SHSNSNGGSV VINGNGFSQS GKIHTCSICF KSFSSGQALG GHKRCHYDGG NNGNEQSATG DNRGFDLNLP
201: ADQVAVVIS
101: SYQALGGHKT SHRKPASNVN VPINQEPSNN SHSNSNGGSV VINGNGFSQS GKIHTCSICF KSFSSGQALG GHKRCHYDGG NNGNEQSATG DNRGFDLNLP
201: ADQVAVVIS
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.