Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42192 | Canola | nucleus | 96.93 | 95.83 |
| CDY65161 | Canola | nucleus | 82.76 | 80.6 |
| CDX82290 | Canola | nucleus | 81.61 | 79.18 |
| CDX99202 | Canola | nucleus | 78.16 | 76.69 |
| AT3G19580.1 | Thale cress | nucleus | 79.69 | 76.19 |
| CDY46162 | Canola | nucleus | 77.78 | 76.03 |
| CDY22361 | Canola | nucleus | 37.16 | 52.43 |
| CDY30794 | Canola | nucleus | 36.78 | 50.79 |
| CDY02102 | Canola | nucleus | 29.89 | 49.37 |
| CDY23027 | Canola | nucleus | 29.89 | 45.88 |
| CDX81313 | Canola | nucleus | 32.57 | 45.7 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.63 | 45.59 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 37.93 | 45.21 |
| CDX84907 | Canola | nucleus | 39.46 | 44.98 |
| CDX90105 | Canola | nucleus | 39.85 | 44.64 |
| CDY11770 | Canola | nucleus | 39.85 | 44.64 |
| CDY27629 | Canola | nucleus | 39.08 | 44.54 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 36.78 | 43.84 |
| CDY03945 | Canola | nucleus | 38.7 | 43.72 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 36.78 | 43.64 |
| CDX83103 | Canola | nucleus | 36.4 | 42.79 |
| CDY43576 | Canola | nucleus | 34.1 | 42.58 |
| CDX68558 | Canola | nucleus | 35.63 | 41.89 |
| CDY37851 | Canola | nucleus | 34.48 | 41.86 |
| CDX68559 | Canola | nucleus | 36.02 | 41.78 |
| CDX70236 | Canola | nucleus, plastid | 36.4 | 41.67 |
| CDY18661 | Canola | nucleus | 32.95 | 41.55 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 37.55 | 41.0 |
| CDY51312 | Canola | nucleus | 34.48 | 40.91 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 36.78 | 40.34 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 37.16 | 40.25 |
| Os03t0610400-01 | Rice | nucleus | 35.25 | 38.66 |
| Os12t0583700-00 | Rice | nucleus | 36.02 | 38.06 |
| CDY08718 | Canola | nucleus | 34.87 | 37.76 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 35.25 | 37.25 |
| CDY36493 | Canola | nucleus | 34.1 | 36.93 |
| Zm00001d030858_P001 | Maize | nucleus | 32.57 | 30.69 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 31.42 | 29.71 |
| EES16240 | Sorghum | nucleus | 32.95 | 29.66 |
| CDY41155 | Canola | nucleus | 25.67 | 27.02 |
| CDX71799 | Canola | nucleus | 26.05 | 26.15 |
| CDY71582 | Canola | nucleus | 27.2 | 26.1 |
| CDX95629 | Canola | nucleus | 27.2 | 25.91 |
| CDX89061 | Canola | nucleus | 26.05 | 25.86 |
| CDY37027 | Canola | nucleus | 27.59 | 25.62 |
| CDY27394 | Canola | nucleus | 27.59 | 25.26 |
| CDX67836 | Canola | nucleus | 27.59 | 24.41 |
| CDX83402 | Canola | nucleus | 27.59 | 24.16 |
| CDY48363 | Canola | nucleus | 26.44 | 24.04 |
| CDY50966 | Canola | nucleus | 29.89 | 20.91 |
| CDY70162 | Canola | nucleus | 15.33 | 18.69 |
| CDY28108 | Canola | nucleus | 31.8 | 18.4 |
| CDY02142 | Canola | nucleus | 18.77 | 18.01 |
| CDY23066 | Canola | plastid | 18.77 | 17.82 |
| CDY40527 | Canola | nucleus | 13.03 | 17.53 |
| CDY42873 | Canola | nucleus | 16.48 | 17.27 |
| CDY32274 | Canola | nucleus | 12.64 | 16.75 |
| CDY09671 | Canola | nucleus | 12.64 | 16.5 |
| CDY53641 | Canola | nucleus | 12.64 | 15.79 |
| CDY50848 | Canola | nucleus | 12.64 | 15.79 |
| CDY69391 | Canola | nucleus | 12.64 | 15.42 |
Protein Annotations
| EnsemblPlants:CDX95435 | EnsemblPlantsGene:GSBRNA2T00101181001 | Gene3D:3.30.160.60 | GO:A0A078E184 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX95435 | ProteinID:CDX95435.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EAC9AC | MapMan:15.5.15 | : | : |
Description
BnaC01g33270D
Coordinates
chrLK031889:+:73387..74172
Molecular Weight (calculated)
28748.2 Da
IEP (calculated)
9.643
GRAVY (calculated)
-0.693
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAMNSPS FTVRKDRIEA TEDDLMNDAV FMEPWLKRKR SKRQRSRSPS PSTSSSPPRS RRPKSESQDL TEEEYLALCL LKLAKDKHSP RPQPQDSTKL
101: SYKCSVCGKA FPSYQALGGH KASHRIKPLT ADNSTSPIIA GEKHHSSATV PPSGKIHECS ICRKVFPTGQ ALGGHKRCHY EGNLGGGSKT ISQSGSVSST
201: VSEDRSNHVL IDLNLPALPE LSLHHNPVVD EEILSPLTGK KPLLLTDRDQ VIKKEDLSLR I
101: SYKCSVCGKA FPSYQALGGH KASHRIKPLT ADNSTSPIIA GEKHHSSATV PPSGKIHECS ICRKVFPTGQ ALGGHKRCHY EGNLGGGSKT ISQSGSVSST
201: VSEDRSNHVL IDLNLPALPE LSLHHNPVVD EEILSPLTGK KPLLLTDRDQ VIKKEDLSLR I
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.