Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX82290 | Canola | nucleus | 95.9 | 95.54 |
CDX95435 | Canola | nucleus | 80.6 | 82.76 |
CDY42192 | Canola | nucleus | 80.97 | 82.2 |
CDX99202 | Canola | nucleus | 79.1 | 79.7 |
AT3G19580.1 | Thale cress | nucleus | 80.97 | 79.49 |
CDY46162 | Canola | nucleus | 79.1 | 79.4 |
CDY22361 | Canola | nucleus | 36.57 | 52.97 |
CDY30794 | Canola | nucleus | 36.19 | 51.32 |
CDY02102 | Canola | nucleus | 29.48 | 50.0 |
CDX81313 | Canola | nucleus | 33.58 | 48.39 |
CDY23027 | Canola | nucleus | 29.48 | 46.47 |
CDX84907 | Canola | nucleus | 39.18 | 45.85 |
CDX90105 | Canola | nucleus | 39.55 | 45.49 |
CDY27629 | Canola | nucleus | 38.81 | 45.41 |
HORVU4Hr1G013460.1 | Barley | nucleus | 36.94 | 45.21 |
TraesCS4A01G236000.1 | Wheat | nucleus | 34.33 | 45.1 |
CDY11770 | Canola | nucleus | 39.18 | 45.06 |
CDY37851 | Canola | nucleus | 35.82 | 44.65 |
CDY43576 | Canola | nucleus | 34.7 | 44.5 |
CDY03945 | Canola | nucleus | 38.06 | 44.16 |
TraesCS4D01G077900.1 | Wheat | nucleus | 35.45 | 43.38 |
CDX83103 | Canola | nucleus | 35.82 | 43.24 |
TraesCS4B01G079000.1 | Wheat | nucleus | 35.45 | 43.18 |
CDY18661 | Canola | nucleus | 33.21 | 43.0 |
CDX68558 | Canola | nucleus | 35.07 | 42.34 |
CDX68559 | Canola | nucleus | 35.45 | 42.22 |
CDX70236 | Canola | nucleus, plastid | 35.82 | 42.11 |
CDY51312 | Canola | nucleus | 34.33 | 41.82 |
TraesCS5B01G076400.1 | Wheat | nucleus | 36.57 | 41.0 |
TraesCS5A01G070600.1 | Wheat | nucleus | 36.57 | 40.66 |
TraesCS5D01G082700.1 | Wheat | nucleus | 35.82 | 40.34 |
CDY08718 | Canola | nucleus | 35.82 | 39.83 |
Os12t0583700-00 | Rice | nucleus | 36.57 | 39.68 |
Os03t0610400-01 | Rice | nucleus | 35.07 | 39.5 |
CDY36493 | Canola | nucleus | 35.07 | 39.0 |
GSMUA_Achr5P08730_001 | Banana | nucleus | 34.7 | 37.65 |
GSMUA_Achr6P24730_001 | Banana | nucleus | 33.58 | 32.61 |
Zm00001d030858_P001 | Maize | nucleus | 30.97 | 29.96 |
EES16240 | Sorghum | nucleus | 31.72 | 29.31 |
CDY41155 | Canola | nucleus | 25.0 | 27.02 |
CDX71799 | Canola | nucleus | 25.37 | 26.15 |
CDX89061 | Canola | nucleus | 25.37 | 25.86 |
CDY71582 | Canola | nucleus | 26.12 | 25.74 |
CDX95629 | Canola | nucleus | 26.12 | 25.55 |
CDY37027 | Canola | nucleus | 26.49 | 25.27 |
CDY27394 | Canola | nucleus | 26.49 | 24.91 |
CDX67836 | Canola | nucleus | 26.49 | 24.07 |
CDY48363 | Canola | nucleus | 25.75 | 24.04 |
CDX83402 | Canola | nucleus | 26.49 | 23.83 |
CDY50966 | Canola | nucleus | 28.73 | 20.64 |
CDY70162 | Canola | nucleus | 15.3 | 19.16 |
CDY28108 | Canola | nucleus | 31.34 | 18.63 |
CDY40527 | Canola | nucleus | 13.06 | 18.04 |
CDY32274 | Canola | nucleus | 13.06 | 17.77 |
CDY02142 | Canola | nucleus | 17.91 | 17.65 |
CDY09671 | Canola | nucleus | 13.06 | 17.5 |
CDY23066 | Canola | plastid | 17.91 | 17.45 |
CDY53641 | Canola | nucleus | 13.43 | 17.22 |
CDY50848 | Canola | nucleus | 13.43 | 17.22 |
CDY42873 | Canola | nucleus | 15.67 | 16.87 |
CDY69391 | Canola | nucleus | 13.06 | 16.36 |
Protein Annotations
EnsemblPlants:CDY65161 | EnsemblPlantsGene:GSBRNA2T00045306001 | Gene3D:3.30.160.60 | GO:A0A078JHK2 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 |
PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY65161 | ProteinID:CDY65161.1 | ScanProsite:PS00028 | SEG:seg |
SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EB24D2 | UniProt:A0A078JHK2 | MapMan:15.5.15 | : |
Description
BnaC03g73930DBnaC03g73930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHK2]
Coordinates
chrLK034675:+:3814..4620
Molecular Weight (calculated)
28872.4 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.534
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAMNSPT TMSSFTVRKD RIGATDDLMN DAVFLEPWLK RKRSKRQRSP SPSSSPPRSH AKSQSQDPSE EEYLALCLLM LAKDQPRTRF QPSLPPPPQA
101: RTKLSYNCSV CGKAFLSYQA LGGHKASHRI KPPTAGDSTA PSIAGEKHPT STTIAPSGKI HECSICHKVF PTGQALGGHK RCHYEGNLGG GGGGSKSVSH
201: SGSVSSTVSE GRSNRVIIDL NLPALPELSL HHDSVVDEEI LSPLTGKKPL LLTGHDQVIK KEDLSLRI
101: RTKLSYNCSV CGKAFLSYQA LGGHKASHRI KPPTAGDSTA PSIAGEKHPT STTIAPSGKI HECSICHKVF PTGQALGGHK RCHYEGNLGG GGGGSKSVSH
201: SGSVSSTVSE GRSNRVIIDL NLPALPELSL HHDSVVDEEI LSPLTGKKPL LLTGHDQVIK KEDLSLRI
001: MALEAMNTPT SSFTRIETKE DLMNDAVFIE PWLKRKRSKR QRSHSPSSSS SSPPRSRPKS QNQDLTEEEY LALCLLMLAK DQPSQTRFHQ QSQSLTPPPE
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
101: SKNLPYKCNV CEKAFPSYQA LGGHKASHRI KPPTVISTTA DDSTAPTISI VAGEKHPIAA SGKIHECSIC HKVFPTGQAL GGHKRCHYEG NLGGGGGGGS
201: KSISHSGSVS STVSEERSHR GFIDLNLPAL PELSLHHNPI VDEEILSPLT GKKPLLLTDH DQVIKKEDLS LKI
Arabidopsis Description
AZF2ZF2 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ97]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.