Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83402 | Canola | nucleus | 93.07 | 85.57 |
| Bra000372.1-P | Field mustard | mitochondrion, nucleus | 93.43 | 82.58 |
| CDY27394 | Canola | nucleus | 72.63 | 69.82 |
| CDY37027 | Canola | nucleus | 71.53 | 69.75 |
| AT2G45120.1 | Thale cress | nucleus | 71.9 | 62.74 |
| CDY71582 | Canola | nucleus | 56.57 | 56.99 |
| CDX71799 | Canola | nucleus | 52.92 | 55.77 |
| CDX89061 | Canola | nucleus | 52.92 | 55.13 |
| CDY41155 | Canola | nucleus | 49.27 | 54.44 |
| CDX67836 | Canola | nucleus | 57.66 | 53.56 |
| CDY48363 | Canola | nucleus | 54.74 | 52.26 |
| PGSC0003DMT400053945 | Potato | cytosol | 24.45 | 43.79 |
| Solyc01g090840.2.1 | Tomato | nucleus | 45.62 | 38.7 |
| VIT_15s0021g02720.t01 | Wine grape | nucleus | 48.91 | 37.33 |
| PGSC0003DMT400066939 | Potato | nucleus | 44.89 | 37.27 |
| CDY02102 | Canola | nucleus | 21.17 | 36.71 |
| KRH76140 | Soybean | nucleus | 47.81 | 35.89 |
| CDY22361 | Canola | nucleus | 23.36 | 34.59 |
| CDY09671 | Canola | nucleus | 25.18 | 34.5 |
| CDY30794 | Canola | nucleus | 23.72 | 34.39 |
| CDY23027 | Canola | nucleus | 21.17 | 34.12 |
| CDX81313 | Canola | nucleus | 22.99 | 33.87 |
| KRH65408 | Soybean | nucleus | 47.81 | 33.76 |
| CDY40527 | Canola | nucleus | 23.72 | 33.51 |
| CDY32274 | Canola | nucleus | 24.09 | 33.5 |
| CDY50848 | Canola | nucleus | 25.55 | 33.49 |
| CDY53641 | Canola | nucleus | 25.55 | 33.49 |
| KRH75355 | Soybean | nucleus | 46.72 | 32.9 |
| CDY69391 | Canola | nucleus | 25.55 | 32.71 |
| CDY43576 | Canola | nucleus | 23.36 | 30.62 |
| CDY18661 | Canola | nucleus | 22.99 | 30.43 |
| GSMUA_Achr4P03310_001 | Banana | nucleus | 28.47 | 30.23 |
| CDX83103 | Canola | nucleus | 24.45 | 30.18 |
| CDX68559 | Canola | nucleus | 24.45 | 29.78 |
| CDY37851 | Canola | nucleus | 23.36 | 29.77 |
| CDX68558 | Canola | nucleus | 24.09 | 29.73 |
| GSMUA_Achr6P34890_001 | Banana | nucleus, plastid | 28.47 | 28.78 |
| GSMUA_Achr9P09370_001 | Banana | nucleus | 28.83 | 28.62 |
| CDY11770 | Canola | nucleus | 24.09 | 28.33 |
| CDX90105 | Canola | nucleus | 24.09 | 28.33 |
| CDY03945 | Canola | nucleus | 23.72 | 28.14 |
| GSMUA_Achr4P32760_001 | Banana | nucleus | 33.58 | 28.13 |
| CDX84907 | Canola | nucleus | 23.36 | 27.95 |
| CDY51312 | Canola | nucleus | 22.26 | 27.73 |
| CDY42192 | Canola | nucleus | 26.64 | 27.65 |
| CDY27629 | Canola | nucleus | 22.99 | 27.51 |
| CDX95435 | Canola | nucleus | 25.91 | 27.2 |
| CDY36493 | Canola | nucleus | 23.72 | 26.97 |
| CDY46162 | Canola | nucleus | 26.28 | 26.97 |
| CDY02142 | Canola | nucleus | 26.64 | 26.84 |
| CDX99202 | Canola | nucleus | 25.91 | 26.69 |
| CDY08718 | Canola | nucleus | 23.36 | 26.56 |
| CDY23066 | Canola | plastid | 26.64 | 26.55 |
| CDX70236 | Canola | nucleus, plastid | 21.9 | 26.32 |
| CDY65161 | Canola | nucleus | 25.55 | 26.12 |
| CDX82290 | Canola | nucleus | 25.55 | 26.02 |
| CDY42873 | Canola | nucleus | 22.99 | 25.3 |
| CDY70162 | Canola | nucleus | 17.52 | 22.43 |
| CDY50966 | Canola | nucleus | 21.9 | 16.09 |
| CDY28108 | Canola | nucleus | 22.63 | 13.75 |
Protein Annotations
| EnsemblPlants:CDX95629 | EnsemblPlantsGene:GSBRNA2T00101508001 | Gene3D:3.30.160.60 | GO:A0A078E525 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF304 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDX95629 | ProteinID:CDX95629.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EF330B | MapMan:15.5.15 | : | : |
Description
BnaC03g25100D
Coordinates
chrLK031890:+:345680..346597
Molecular Weight (calculated)
31289.4 Da
IEP (calculated)
7.526
GRAVY (calculated)
-1.057
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MERYKCRFCF KSFLNGRALG GHMRSHMLTL PSKRELYELT ERPSQLSEET ESDASSSSDE EEEEDHANWG EFESETESSR MNPTRKRTKR TRKLGSFDFD
101: DFKKVRTSQP GCEVGTEPEH HSSEASDTTT EEDLALCLIM LSRDKWKQQK NKTIVNRGGR GRGRFKCETC GKVFNSYQAL GGHRASHKKN KTFTTMTTST
201: KTEHEKIECE KVHQCPICFR VFTSGQALGG HKRSHGSNNV GSRRELSVNQ STMIDLNLPA PNEDDETSVV FNEW
101: DFKKVRTSQP GCEVGTEPEH HSSEASDTTT EEDLALCLIM LSRDKWKQQK NKTIVNRGGR GRGRFKCETC GKVFNSYQAL GGHRASHKKN KTFTTMTTST
201: KTEHEKIECE KVHQCPICFR VFTSGQALGG HKRSHGSNNV GSRRELSVNQ STMIDLNLPA PNEDDETSVV FNEW
001: MERYKCRFCF KSFINGRALG GHMRSHMLTL SAERCVITGE AEEEVEERPS QLCDDDDDTE SDASSSSGEF DNQKMNRLDD ELEFDFAEDD DVESETESSR
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW
101: INPTRRRSKR TRKLGSFDFD FEKLTTSQPS ELVAEPEHHS SASDTTTEED LAFCLIMLSR DKWKQQKKKK QRVEEDETDH DSEDYKSSKS RGRFKCETCG
201: KVFKSYQALG GHRASHKKNK ACMTKTEQVE TEYVLGVKEK KVHECPICFR VFTSGQALGG HKRSHGSNIG AGRGLSVSQI VQIEEEVSVK QRMIDLNLPA
301: PNEEDETSLV FDEW
Arabidopsis Description
ZAT4Zinc finger protein ZAT4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.