Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009464.1-P | Field mustard | plastid | 99.56 | 99.56 |
| CDY51312 | Canola | nucleus | 87.28 | 90.45 |
| AT5G04340.1 | Thale cress | nucleus | 83.33 | 79.83 |
| CDY22361 | Canola | nucleus | 56.58 | 69.73 |
| CDY03945 | Canola | nucleus | 69.74 | 68.83 |
| CDY30794 | Canola | nucleus | 56.58 | 68.25 |
| CDX84907 | Canola | nucleus | 68.42 | 68.12 |
| CDY27629 | Canola | nucleus | 68.42 | 68.12 |
| CDY11770 | Canola | nucleus | 69.3 | 67.81 |
| CDX90105 | Canola | nucleus | 68.86 | 67.38 |
| KRH15443 | Soybean | nucleus | 47.37 | 46.35 |
| KRH05601 | Soybean | nucleus | 47.81 | 45.42 |
| CDX81313 | Canola | nucleus | 34.65 | 42.47 |
| CDY02102 | Canola | nucleus | 28.95 | 41.77 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 39.47 | 40.91 |
| CDY43576 | Canola | nucleus | 37.28 | 40.67 |
| CDY23027 | Canola | nucleus | 29.82 | 40.0 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 35.09 | 39.22 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 37.28 | 38.81 |
| CDY37851 | Canola | nucleus | 36.4 | 38.6 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 36.84 | 38.36 |
| PGSC0003DMT400084751 | Potato | nucleus | 43.86 | 38.17 |
| CDY18661 | Canola | nucleus | 34.65 | 38.16 |
| CDX83103 | Canola | nucleus | 36.4 | 37.39 |
| CDX68558 | Canola | nucleus | 36.4 | 37.39 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 39.47 | 37.34 |
| CDX68559 | Canola | nucleus | 36.84 | 37.33 |
| CDX99202 | Canola | nucleus | 43.42 | 37.22 |
| CDY46162 | Canola | nucleus | 43.42 | 37.08 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 38.6 | 36.97 |
| Os03t0610400-01 | Rice | nucleus | 38.6 | 36.97 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 38.16 | 36.4 |
| CDX95435 | Canola | nucleus | 41.67 | 36.4 |
| CDY42192 | Canola | nucleus | 41.67 | 35.98 |
| CDY65161 | Canola | nucleus | 42.11 | 35.82 |
| CDX82290 | Canola | nucleus | 42.11 | 35.69 |
| CDY08718 | Canola | nucleus | 37.72 | 35.68 |
| CDY36493 | Canola | nucleus | 36.84 | 34.85 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 36.84 | 34.01 |
| Os12t0583700-00 | Rice | nucleus | 36.4 | 33.6 |
| Solyc01g107170.2.1 | Tomato | nucleus | 44.3 | 32.58 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 35.53 | 29.35 |
| Zm00001d030858_P001 | Maize | nucleus | 34.21 | 28.16 |
| EES16240 | Sorghum | nucleus | 34.21 | 26.9 |
| CDY41155 | Canola | nucleus | 25.88 | 23.79 |
| CDX89061 | Canola | nucleus | 27.19 | 23.57 |
| CDY71582 | Canola | nucleus | 27.63 | 23.16 |
| CDX71799 | Canola | nucleus | 25.88 | 22.69 |
| CDY37027 | Canola | nucleus | 27.63 | 22.42 |
| CDY27394 | Canola | nucleus | 27.63 | 22.11 |
| CDX67836 | Canola | nucleus | 28.51 | 22.03 |
| CDX95629 | Canola | nucleus | 26.32 | 21.9 |
| CDY48363 | Canola | nucleus | 26.32 | 20.91 |
| CDX83402 | Canola | nucleus | 27.19 | 20.81 |
| CDY50966 | Canola | nucleus | 32.46 | 19.84 |
| CDY70162 | Canola | nucleus | 17.54 | 18.69 |
| CDY42873 | Canola | nucleus | 19.3 | 17.67 |
| CDY28108 | Canola | nucleus | 33.77 | 17.07 |
| CDY02142 | Canola | nucleus | 20.18 | 16.91 |
| CDY23066 | Canola | plastid | 20.18 | 16.73 |
| CDY40527 | Canola | nucleus | 13.6 | 15.98 |
| CDY09671 | Canola | nucleus | 13.6 | 15.5 |
| CDY50848 | Canola | nucleus | 14.04 | 15.31 |
| CDY53641 | Canola | nucleus | 14.04 | 15.31 |
| CDY32274 | Canola | nucleus | 13.16 | 15.23 |
| CDY69391 | Canola | nucleus | 14.04 | 14.95 |
Protein Annotations
| EnsemblPlants:CDX70236 | EnsemblPlantsGene:GSBRNA2T00136367001 | GO:A0A078BZV8 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | PFAM:PF13912 |
| PFscan:PS50157 | ProteinID:CDX70236 | ProteinID:CDX70236.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EED5A8 | MapMan:15.5.15 | : | : | : |
Description
BnaA10g25850D
Coordinates
chrLK031790:+:3704208..3704985
Molecular Weight (calculated)
24171.3 Da
IEP (calculated)
9.343
GRAVY (calculated)
-0.594
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALSSPR LASPVPTLFQ DSAVGFHGSK GKRSKRSRSE FDRSLTEDEY IALCLMLLAR DGNRTRHLPS SSSSPPLLPT LTSTHLHKCS VCDKAFSSYQ
101: ALGGHKASHR KNSSQTQSSG GDEKSTSSAI TIASHGGGGG GSVKSHVCSI CNKSFATGQA LGGHKRCHYE GKNGSSSEGV GSTSHVSSGS HHHHRGFDLN
201: IPPIPEFSTV NGEEEVMSPM PTKKMRLE
101: ALGGHKASHR KNSSQTQSSG GDEKSTSSAI TIASHGGGGG GSVKSHVCSI CNKSFATGQA LGGHKRCHYE GKNGSSSEGV GSTSHVSSGS HHHHRGFDLN
201: IPPIPEFSTV NGEEEVMSPM PTKKMRLE
001: MALETLTSPR LSSPMPTLFQ DSALGFHGSK GKRSKRSRSE FDRQSLTEDE YIALCLMLLA RDGDRNRDLD LPSSSSSPPL LPPLPTPIYK CSVCDKAFSS
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
101: YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR
201: GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP
Arabidopsis Description
ZAT6Zinc finger protein ZAT6 [Source:UniProtKB/Swiss-Prot;Acc:O22533]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.