Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G070600.1 | Wheat | nucleus | 55.06 | 56.43 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 54.25 | 56.3 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 54.25 | 56.07 |
| Os03t0610400-01 | Rice | nucleus | 51.42 | 53.36 |
| Zm00001d030858_P001 | Maize | nucleus | 52.63 | 46.93 |
| CDY22361 | Canola | nucleus | 34.82 | 46.49 |
| EES16240 | Sorghum | nucleus | 53.44 | 45.52 |
| Bra033666.1-P | Field mustard | nucleus | 34.01 | 45.41 |
| PGSC0003DMT400091896 | Potato | nucleus | 34.82 | 45.26 |
| CDY02102 | Canola | nucleus | 28.74 | 44.94 |
| VIT_18s0001g09230.t01 | Wine grape | nucleus | 41.7 | 44.21 |
| AT5G43170.1 | Thale cress | nucleus | 34.01 | 43.52 |
| CDY30794 | Canola | nucleus | 33.2 | 43.39 |
| Solyc12g088390.1.1 | Tomato | nucleus | 34.82 | 43.0 |
| KRH52082 | Soybean | nucleus | 40.08 | 42.49 |
| CDY23027 | Canola | nucleus | 29.15 | 42.35 |
| VIT_03s0091g00690.t01 | Wine grape | nucleus | 40.08 | 42.13 |
| KRH61394 | Soybean | nucleus | 39.68 | 42.06 |
| PGSC0003DMT400030168 | Potato | nucleus | 35.22 | 41.63 |
| KRH05601 | Soybean | nucleus | 40.08 | 41.25 |
| Os03t0764100-01 | Rice | nucleus | 44.53 | 40.89 |
| CDX81313 | Canola | nucleus | 30.77 | 40.86 |
| PGSC0003DMT400055391 | Potato | nucleus | 31.58 | 40.41 |
| KRH15443 | Soybean | nucleus | 38.06 | 40.34 |
| Bra032845.1-P | Field mustard | nucleus | 36.84 | 39.74 |
| KRH35675 | Soybean | nucleus | 41.3 | 39.69 |
| KRG91102 | Soybean | nucleus | 41.7 | 39.62 |
| CDX84907 | Canola | nucleus | 36.44 | 39.3 |
| CDY27629 | Canola | nucleus | 36.44 | 39.3 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 39.27 | 39.27 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 36.84 | 39.06 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 40.89 | 38.85 |
| AT1G27730.1 | Thale cress | nucleus | 35.63 | 38.77 |
| CDX90105 | Canola | nucleus | 36.44 | 38.63 |
| CDY11770 | Canola | nucleus | 36.44 | 38.63 |
| Bra010922.1-P | Field mustard | nucleus | 36.44 | 38.63 |
| CDX68559 | Canola | nucleus | 34.41 | 37.78 |
| AT3G49930.1 | Thale cress | nucleus | 32.79 | 37.67 |
| CDY03945 | Canola | nucleus | 35.22 | 37.66 |
| CDX99202 | Canola | nucleus | 40.49 | 37.59 |
| Bra012914.1-P | Field mustard | nucleus | 32.39 | 37.56 |
| Bra029985.1-P | Field mustard | nucleus | 33.6 | 37.56 |
| Bra022436.1-P | Field mustard | nucleus | 40.49 | 37.45 |
| CDX68558 | Canola | nucleus | 33.6 | 37.39 |
| CDX83103 | Canola | nucleus | 33.6 | 37.39 |
| CDY43576 | Canola | nucleus | 31.58 | 37.32 |
| CDY51312 | Canola | nucleus | 33.2 | 37.27 |
| CDY18661 | Canola | nucleus | 31.17 | 37.2 |
| Os07t0590100-01 | Rice | cytosol, nucleus | 30.36 | 37.13 |
| Os03t0437100-01 | Rice | nucleus | 29.96 | 37.0 |
| Os11t0340477-01 | Rice | nucleus | 29.96 | 37.0 |
| CDX82290 | Canola | nucleus | 40.08 | 36.8 |
| CDY46162 | Canola | nucleus | 39.68 | 36.7 |
| Bra001752.1-P | Field mustard | nucleus | 39.68 | 36.7 |
| CDY65161 | Canola | nucleus | 39.68 | 36.57 |
| Bra009464.1-P | Field mustard | plastid | 33.6 | 36.4 |
| CDX70236 | Canola | nucleus, plastid | 33.6 | 36.4 |
| Bra038219.1-P | Field mustard | nucleus | 38.87 | 36.36 |
| CDX95435 | Canola | nucleus | 38.06 | 36.02 |
| CDY42192 | Canola | nucleus | 38.46 | 35.98 |
| PGSC0003DMT400084751 | Potato | nucleus | 38.06 | 35.88 |
| AT5G04340.1 | Thale cress | nucleus | 34.41 | 35.71 |
| CDY37851 | Canola | nucleus | 30.77 | 35.35 |
| AT3G19580.1 | Thale cress | nucleus | 38.87 | 35.16 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 32.39 | 34.63 |
| PGSC0003DMT400040388 | Potato | cytosol | 29.55 | 34.43 |
| Bra037845.1-P | Field mustard | nucleus | 31.58 | 33.77 |
| PGSC0003DMT400085102 | Potato | nucleus | 29.55 | 32.44 |
| PGSC0003DMT400072661 | Potato | nucleus | 34.01 | 32.43 |
| Bra024448.1-P | Field mustard | nucleus | 31.58 | 32.37 |
| Bra031834.1-P | Field mustard | nucleus | 30.77 | 32.34 |
| CDY08718 | Canola | nucleus | 31.17 | 31.95 |
| CDY36493 | Canola | nucleus | 31.17 | 31.95 |
| AT5G67450.1 | Thale cress | nucleus | 31.58 | 31.84 |
| Os03t0437200-01 | Rice | cytosol, nucleus, vacuole | 27.94 | 31.36 |
| Solyc01g107170.2.1 | Tomato | nucleus | 38.87 | 30.97 |
| PGSC0003DMT400006126 | Potato | nucleus | 35.63 | 30.56 |
| PGSC0003DMT400095976 | Potato | nucleus | 29.15 | 30.25 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 33.6 | 30.07 |
| Os08t0300366-00 | Rice | cytosol, nucleus, plastid | 17.0 | 29.58 |
| PGSC0003DMT400024799 | Potato | cytosol | 22.27 | 28.21 |
| Os07t0209600-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 30.36 | 25.34 |
| Os02t0659500-01 | Rice | mitochondrion | 25.51 | 18.48 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 24.7 | 16.99 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:4352653 | ProteinID:ABA99704.1 | ProteinID:BAF30167.1 | ProteinID:BAT17839.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:IPR013087 | EnsemblPlantsGene:Os12g0583700 | EnsemblPlants:Os12t0583700-00 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF263 | UniProt:Q2QN06 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI00001A53B2 | RefSeq:XP_015620192.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
ZINC FINGER PROTEIN 252Zinc finger, C2H2-type domain containing protein. (Os12t0583700-00)
Coordinates
chr12:-:24237212..24238416
Molecular Weight (calculated)
24947.4 Da
IEP (calculated)
7.803
GRAVY (calculated)
-0.270
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEAVLEAS RSSSEEEAEV IVTHGGGGGG GGGGGQVEGW GKRKRSRRRR PQLPPSEEEY LALCLLMLAR GRRDGDDVAA SASAAAAAVE HRCSVCGKAF
101: ASYQALGGHK ASHRKPPPPA MVDDDEVVVE TKPAAIATPS SSASGVSGGG GGRAHECNVC GKAFPTGQAL GGHKRCHYDG TIGSAAGAGA SKPAAKTTVA
201: VAASRGFDLN LPALPDVAAA ADQRCAAEDD EVLSPLAFKK PRLMIPA
101: ASYQALGGHK ASHRKPPPPA MVDDDEVVVE TKPAAIATPS SSASGVSGGG GGRAHECNVC GKAFPTGQAL GGHKRCHYDG TIGSAAGAGA SKPAAKTTVA
201: VAASRGFDLN LPALPDVAAA ADQRCAAEDD EVLSPLAFKK PRLMIPA
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.