Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0764100-01 | Rice | nucleus | 57.75 | 30.48 |
| Zm00001d013208_P001 | Maize | nucleus | 48.59 | 26.14 |
| TraesCS5B01G406000.1 | Wheat | nucleus | 47.89 | 26.05 |
| EER90834 | Sorghum | nucleus | 52.11 | 25.43 |
| Zm00001d034145_P001 | Maize | nucleus | 47.18 | 24.1 |
| HORVU5Hr1G097500.3 | Barley | nucleus, plastid | 47.89 | 22.01 |
| TraesCS5A01G401200.1 | Wheat | nucleus | 47.89 | 20.61 |
| TraesCS5D01G411400.1 | Wheat | nucleus | 46.48 | 19.82 |
| Os11t0340477-01 | Rice | nucleus | 27.46 | 19.5 |
| Os03t0437100-01 | Rice | nucleus | 27.46 | 19.5 |
| Os03t0610400-01 | Rice | nucleus | 32.39 | 19.33 |
| Zm00001d017695_P001 | Maize | extracellular | 18.31 | 18.7 |
| Os12t0583700-00 | Rice | nucleus | 29.58 | 17.0 |
| Os03t0437200-01 | Rice | cytosol, nucleus, vacuole | 25.35 | 16.36 |
| Os07t0590100-01 | Rice | cytosol, nucleus | 23.24 | 16.34 |
| Os07t0209600-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 29.58 | 14.19 |
| Os10t0555300-01 | Rice | mitochondrion, nucleus | 22.54 | 8.91 |
| Os02t0659500-01 | Rice | mitochondrion | 19.01 | 7.92 |
Protein Annotations
| Gene3D:3.30.160.60 | MapMan:35.2 | UniProt:A0A0P0XER8 | ProteinID:BAT04808.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR013087 | EnsemblPlantsGene:Os08g0300366 | EnsemblPlants:Os08t0300366-00 | PFAM:PF13912 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF218 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00039392C7 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
Zinc finger, C2H2 domain containing protein. (Os08t0300366-00)
Coordinates
chr8:+:12358711..12359628
Molecular Weight (calculated)
14874.5 Da
IEP (calculated)
12.137
GRAVY (calculated)
-0.528
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALGGHHRV QAPPPLSAPV GAEFKCSVCG RSFSSYQALG GHKTSHRFKL PTPPASPVLA PASSEPAAAT TVSRRRLRSR RWCGRRQVRS SSAPSAASLS
101: GAWRPQDEPP GQAADSARSS GNGHSAARAF DLNLPAGAIR DR
101: GAWRPQDEPP GQAADSARSS GNGHSAARAF DLNLPAGAIR DR
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Arabidopsis Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.