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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER97472 Sorghum nucleus 49.51 50.76
Zm00001d022002_P001 Maize nucleus 48.02 48.99
Os03t0437100-01 Rice nucleus 40.59 41.0
Os11t0340477-01 Rice nucleus 40.59 41.0
Os03t0437200-01 Rice cytosol, nucleus, vacuole 35.15 32.27
Os12t0583700-00 Rice nucleus 37.13 30.36
Os03t0610400-01 Rice nucleus 31.68 26.89
Os03t0764100-01 Rice nucleus 31.19 23.42
Os08t0300366-00 Rice cytosol, nucleus, plastid 16.34 23.24
CDY70162 Canola nucleus 18.32 17.29
Bra029315.1-P Field mustard nucleus 17.82 15.45
CDY42873 Canola nucleus 18.32 14.86
Os07t0209600-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 20.79 14.19
Os02t0659500-01 Rice mitochondrion 23.76 14.08
Bra012953.1-P Field mustard plastid 17.33 12.73
CDY02142 Canola nucleus 16.83 12.5
CDY23066 Canola plastid 16.83 12.36
Os10t0555300-01 Rice mitochondrion, nucleus 21.29 11.98
AT5G61470.1 Thale cress nucleus 16.83 11.18
Protein Annotations
MapMan:15.5.15UniProt:A0A0P0X8R3ProteinID:BAT02431.1GO:GO:0003674GO:GO:0003676GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634InterPro:IPR013087EnsemblPlantsGene:Os07g0590100
EnsemblPlants:Os07t0590100-01PFAM:PF13912ScanProsite:PS00028PFscan:PS50157PANTHER:PTHR26374PANTHER:PTHR26374:SF189
SMART:SM00355SUPFAM:SSF57667UniParc:UPI000393AF38InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typeSEG:seg
Description
Zinc finger, C2H2 domain containing protein. (Os07t0590100-01)
Coordinates
chr7:+:24055052..24055945
Molecular Weight (calculated)
20566.1 Da
IEP (calculated)
8.397
GRAVY (calculated)
-0.274
Length
202 amino acids
Sequence
(BLAST)
001: RDVMEQGGGA ADGGDLISLC LMALAAAARG ESTALALALA PPPPELHFRC SLCGKAFASY QALGGHKASH RKPSAAAAAP PAHRDVVVAA APASSGRVAA
101: DADAASEADG RRRRHVCSLC RRGFATGQAL GGHKRFHYLH GPSVSATVSS AATAASVGAA FDLNVAPIKE IAGEQRRCGE EADDDDEAES PSPAKKPRRR
201: PG
Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.