Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER97472 | Sorghum | nucleus | 49.51 | 50.76 |
Zm00001d022002_P001 | Maize | nucleus | 48.02 | 48.99 |
Os03t0437100-01 | Rice | nucleus | 40.59 | 41.0 |
Os11t0340477-01 | Rice | nucleus | 40.59 | 41.0 |
Os03t0437200-01 | Rice | cytosol, nucleus, vacuole | 35.15 | 32.27 |
Os12t0583700-00 | Rice | nucleus | 37.13 | 30.36 |
Os03t0610400-01 | Rice | nucleus | 31.68 | 26.89 |
Os03t0764100-01 | Rice | nucleus | 31.19 | 23.42 |
Os08t0300366-00 | Rice | cytosol, nucleus, plastid | 16.34 | 23.24 |
CDY70162 | Canola | nucleus | 18.32 | 17.29 |
Bra029315.1-P | Field mustard | nucleus | 17.82 | 15.45 |
CDY42873 | Canola | nucleus | 18.32 | 14.86 |
Os07t0209600-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 20.79 | 14.19 |
Os02t0659500-01 | Rice | mitochondrion | 23.76 | 14.08 |
Bra012953.1-P | Field mustard | plastid | 17.33 | 12.73 |
CDY02142 | Canola | nucleus | 16.83 | 12.5 |
CDY23066 | Canola | plastid | 16.83 | 12.36 |
Os10t0555300-01 | Rice | mitochondrion, nucleus | 21.29 | 11.98 |
AT5G61470.1 | Thale cress | nucleus | 16.83 | 11.18 |
Protein Annotations
MapMan:15.5.15 | UniProt:A0A0P0X8R3 | ProteinID:BAT02431.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 | EnsemblPlantsGene:Os07g0590100 |
EnsemblPlants:Os07t0590100-01 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF189 |
SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000393AF38 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
Zinc finger, C2H2 domain containing protein. (Os07t0590100-01)
Coordinates
chr7:+:24055052..24055945
Molecular Weight (calculated)
20566.1 Da
IEP (calculated)
8.397
GRAVY (calculated)
-0.274
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: RDVMEQGGGA ADGGDLISLC LMALAAAARG ESTALALALA PPPPELHFRC SLCGKAFASY QALGGHKASH RKPSAAAAAP PAHRDVVVAA APASSGRVAA
101: DADAASEADG RRRRHVCSLC RRGFATGQAL GGHKRFHYLH GPSVSATVSS AATAASVGAA FDLNVAPIKE IAGEQRRCGE EADDDDEAES PSPAKKPRRR
201: PG
101: DADAASEADG RRRRHVCSLC RRGFATGQAL GGHKRFHYLH GPSVSATVSS AATAASVGAA FDLNVAPIKE IAGEQRRCGE EADDDDEAES PSPAKKPRRR
201: PG
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.