Factsheet for Os03t0764100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 21045556

gfp PMID: 21045556 doi

VR Kokkirala, P Yonggang, S Abbagani, Z Zhu, P Umate

Department of Biotechnology, Kakatiya University, Warangal, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G406000.1	Wheat	nucleus	77.7	80.08
Zm00001d034145_P001	Maize	nucleus	69.52	67.27
Zm00001d017695_P001	Maize	extracellular	34.57	66.91
Zm00001d013208_P001	Maize	nucleus	65.06	66.29
HORVU5Hr1G097500.3	Barley	nucleus, plastid	75.84	66.02
EER90834	Sorghum	nucleus	71.38	65.98
TraesCS5A01G401200.1	Wheat	nucleus	77.32	63.03
TraesCS5D01G411400.1	Wheat	nucleus	76.58	61.86
Os08t0300366-00	Rice	cytosol, nucleus, plastid	30.48	57.75
Os03t0610400-01	Rice	nucleus	41.64	47.06
Os12t0583700-00	Rice	nucleus	40.89	44.53
Os11t0340477-01	Rice	nucleus	29.37	39.5
Os03t0437100-01	Rice	nucleus	29.37	39.5
Os03t0437200-01	Rice	cytosol, nucleus, vacuole	27.14	33.18
Os07t0590100-01	Rice	cytosol, nucleus	23.42	31.19
Os07t0209600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	34.2	31.08
Os02t0659500-01	Rice	mitochondrion	22.3	17.6
Os10t0555300-01	Rice	mitochondrion, nucleus	22.68	16.99

Protein Annotations

MapMan:15.5.15	EntrezGene:4334213	ProteinID:AAL34135.1	ProteinID:ABF99028.1	ProteinID:BAF13280.1	ProteinID:BAS86531.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	InterPro:IPR013087	EnsemblPlantsGene:Os03g0764100	EnsemblPlants:Os03t0764100-01	PFAM:PF13912	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR26374	PANTHER:PTHR26374:SF218	UniProt:Q7G7I8	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI00000AA468	RefSeq:XP_015633313.1	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

finger protein WZF1Zinc finger transcription factor ZF1. (Os03t0764100-01)

Coordinates

chr3:-:31604982..31606215

Molecular Weight (calculated)

28294.3 Da

IEP (calculated)

8.163

GRAVY (calculated)

-0.473

Length

269 amino acids

Sequence
(BLAST)

001: MSSASSMEAL HAAVLKEEQQ QHEVEEATVV TSSSATSGEE GGHLPQGWAK RKRSRRQRSE EENLALCLLM LARGGHHRVQ APPPLSASAP PPAGAEFKCS
101: VCGKSFSSYQ ALGGHKTSHR VKLPTPPAAP VLAPAPVAAL LPSAEDREPA TSSTAASSDG MTNRVHRCSI CQKEFPTGQA LGGHKRKHYD GGVGAGAGAS
201: STELLATVAA ESEVGSSGNG QSATRAFDLN LPAVPEFVWR PCSKGKKMWD EEEEVQSPLA FKKPRLLTA

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.