CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91102	Soybean	nucleus	91.83	90.77
VIT_18s0001g09230.t01	Wine grape	nucleus	50.19	55.36
KRH15443	Soybean	nucleus	47.86	52.79
KRH52082	Soybean	nucleus	47.08	51.93
KRH05601	Soybean	nucleus	48.25	51.67
KRH61394	Soybean	nucleus	46.69	51.5
TraesCS4A01G236000.1	Wheat	nucleus	39.3	49.51
TraesCS4B01G079000.1	Wheat	nucleus	39.69	46.36
HORVU4Hr1G013460.1	Barley	nucleus	38.91	45.66
TraesCS4D01G077900.1	Wheat	nucleus	38.13	44.75
Os12t0583700-00	Rice	nucleus	39.69	41.3
TraesCS5A01G070600.1	Wheat	nucleus	38.52	41.08
TraesCS5B01G076400.1	Wheat	nucleus	38.13	41.0
TraesCS5D01G082700.1	Wheat	nucleus	37.35	40.34
Os03t0610400-01	Rice	nucleus	36.19	39.08
GSMUA_Achr5P08730_001	Banana	nucleus	36.97	38.46
Zm00001d030858_P001	Maize	nucleus	36.19	33.57
GSMUA_Achr6P24730_001	Banana	nucleus	35.02	32.61
EES16240	Sorghum	nucleus	36.58	32.41
KRH04135	Soybean	nucleus	22.18	21.67
KRH57408	Soybean	nucleus	21.01	20.38
KRH28087	Soybean	nucleus	22.18	19.79
KRH77360	Soybean	nucleus	21.79	18.79
KRH76140	Soybean	nucleus	25.29	17.81
KRH39952	Soybean	nucleus	21.01	17.65
KRH65408	Soybean	nucleus	25.68	17.01
KRH75355	Soybean	nucleus	24.51	16.2

Protein Annotations

EntrezGene:100806788	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02006697	EnsemblPlantsGene:GLYMA_10G257900	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0008150	GO:GO:0009719	GO:GO:0010200	UniProt:I1LEF1	InterPro:IPR013087	EnsemblPlants:KRH35675
ProteinID:KRH35675	ProteinID:KRH35675.1	PFAM:PF13912	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF263	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000233CC6F	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:48422948..48424339

Molecular Weight (calculated)

27519.6 Da

IEP (calculated)

7.327

GRAVY (calculated)

-0.723

Length

257 amino acids

Sequence
(BLAST)

001: MALEALNSPT AATTPFRGYQ EEEEEVDLHL REPWAKRKRS KRPRFESEEE YLALCLIMLA QSGNNNNTQL PSSSQSHKEA SPPLKLSHRC TVCNKAFPSY
101: QALGGHKASH RKASSESNTT ASAVAVSATA NDSVSASTVG GGRMHECSIC HKSFPTGQAL GGHKRCHYDG GNNHSNSNAN GNNSSGVTTS DGGAASSSSH
201: AFRGFDLNLP APLTEFWSPA GFDFGKKKVG VEQEVESPLP VTAKRPRLFS GEDNEEA

Best Arabidopsis Sequence Match ( AT5G67450.1 )
(BLAST)

001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS

Arabidopsis Description

AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.