Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15443 | Soybean | nucleus | 85.83 | 88.41 |
| KRH52082 | Soybean | nucleus | 59.17 | 60.94 |
| KRH61394 | Soybean | nucleus | 58.75 | 60.52 |
| CDY22361 | Canola | nucleus | 44.58 | 57.84 |
| Bra033666.1-P | Field mustard | nucleus | 43.75 | 56.76 |
| CDY30794 | Canola | nucleus | 44.17 | 56.08 |
| PGSC0003DMT400091896 | Potato | nucleus | 43.33 | 54.74 |
| AT5G43170.1 | Thale cress | nucleus | 43.33 | 53.89 |
| Solyc12g088390.1.1 | Tomato | nucleus | 42.92 | 51.5 |
| PGSC0003DMT400055391 | Potato | nucleus | 41.25 | 51.3 |
| PGSC0003DMT400030168 | Potato | nucleus | 44.58 | 51.2 |
| AT1G27730.1 | Thale cress | nucleus | 48.33 | 51.1 |
| CDY03945 | Canola | nucleus | 49.17 | 51.08 |
| CDY27629 | Canola | nucleus | 48.33 | 50.66 |
| CDX84907 | Canola | nucleus | 48.33 | 50.66 |
| Bra032845.1-P | Field mustard | nucleus | 48.33 | 50.66 |
| Solyc04g077980.1.1 | Tomato | nucleus, plastid | 54.58 | 50.38 |
| Bra010922.1-P | Field mustard | nucleus | 47.92 | 49.36 |
| CDX90105 | Canola | nucleus | 47.92 | 49.36 |
| CDY11770 | Canola | nucleus | 47.5 | 48.93 |
| KRH35675 | Soybean | nucleus | 51.67 | 48.25 |
| Bra009464.1-P | Field mustard | plastid | 45.42 | 47.81 |
| CDX70236 | Canola | nucleus, plastid | 45.42 | 47.81 |
| KRG91102 | Soybean | nucleus | 50.83 | 46.92 |
| CDY51312 | Canola | nucleus | 42.5 | 46.36 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 38.75 | 45.59 |
| PGSC0003DMT400086329 | Potato | nucleus, plastid | 43.75 | 45.45 |
| AT5G04340.1 | Thale cress | nucleus | 45.0 | 45.38 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 40.83 | 44.75 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 40.42 | 44.29 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 40.42 | 44.09 |
| PGSC0003DMT400072661 | Potato | nucleus | 45.42 | 42.08 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 41.25 | 41.6 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 41.25 | 41.42 |
| Os03t0610400-01 | Rice | nucleus | 40.42 | 40.76 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 40.83 | 40.66 |
| PGSC0003DMT400040388 | Potato | cytosol | 35.42 | 40.09 |
| Os12t0583700-00 | Rice | nucleus | 41.25 | 40.08 |
| PGSC0003DMT400085102 | Potato | nucleus | 37.5 | 40.0 |
| PGSC0003DMT400084751 | Potato | nucleus | 42.92 | 39.31 |
| PGSC0003DMT400006126 | Potato | nucleus | 47.08 | 39.24 |
| PGSC0003DMT400095976 | Potato | nucleus | 38.33 | 38.66 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 38.33 | 37.25 |
| PGSC0003DMT400024799 | Potato | cytosol | 27.92 | 34.36 |
| Solyc01g107170.2.1 | Tomato | nucleus | 43.33 | 33.55 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 37.5 | 32.61 |
| Zm00001d030858_P001 | Maize | nucleus | 37.08 | 32.13 |
| EES16240 | Sorghum | nucleus | 36.67 | 30.34 |
| KRH04135 | Soybean | nucleus | 25.42 | 23.19 |
| KRH57408 | Soybean | nucleus | 23.75 | 21.51 |
| KRH28087 | Soybean | nucleus | 25.0 | 20.83 |
| KRH39952 | Soybean | nucleus | 25.0 | 19.61 |
| KRH77360 | Soybean | nucleus | 24.17 | 19.46 |
| KRH76140 | Soybean | nucleus | 27.92 | 18.36 |
| KRH65408 | Soybean | nucleus | 28.75 | 17.78 |
| KRH75355 | Soybean | nucleus | 28.33 | 17.48 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02010760 | EnsemblPlantsGene:GLYMA_17G236200 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0010200 | UniProt:I1MXI5 | InterPro:IPR013087 | EnsemblPlants:KRH05601 | ProteinID:KRH05601 |
| ProteinID:KRH05601.1 | PFAM:PF13912 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF319 |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00023DA06C | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:39123094..39124429
Molecular Weight (calculated)
25799.1 Da
IEP (calculated)
8.396
GRAVY (calculated)
-0.707
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEALNSPT TTAPSFPFDD PTIPWAKRKR SKRSRDHPSE EEYLALCLIM LARGGTTTVN NRHVSPPPPQ PQPQPTPDPS TKLSYKCSVC DKSFPSYQAL
101: GGHKASHRKL AGAAEDQPPS TTTSSAAATS SASGGKAHEC SICHKSFPTG QALGGHKRCH YEGNGNGNNN NSNSVVTVAS EGVGSTHTVS HGHHRDFDLN
201: IPAFPDFSTK VGEDEVESPH PVMKKPRLFV IPKIEIPQFQ
101: GGHKASHRKL AGAAEDQPPS TTTSSAAATS SASGGKAHEC SICHKSFPTG QALGGHKRCH YEGNGNGNNN NSNSVVTVAS EGVGSTHTVS HGHHRDFDLN
201: IPAFPDFSTK VGEDEVESPH PVMKKPRLFV IPKIEIPQFQ
001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL
Arabidopsis Description
ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.