Factsheet for Bra032845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27629	Canola	nucleus	98.69	98.69
CDX84907	Canola	nucleus	97.38	97.38
Bra010922.1-P	Field mustard	nucleus	86.9	85.41
AT1G27730.1	Thale cress	nucleus	82.97	83.7
Bra033666.1-P	Field mustard	nucleus	60.7	75.14
Bra009464.1-P	Field mustard	plastid	67.25	67.54
KRH15443	Soybean	nucleus	50.22	49.36
KRH05601	Soybean	nucleus	50.66	48.33
Bra012914.1-P	Field mustard	nucleus	38.86	41.78
Bra029985.1-P	Field mustard	nucleus	39.74	41.18
TraesCS4B01G079000.1	Wheat	nucleus	38.43	40.0
TraesCS4D01G077900.1	Wheat	nucleus	37.99	39.73
Bra001752.1-P	Field mustard	nucleus	46.29	39.7
PGSC0003DMT400084751	Potato	nucleus	45.41	39.69
Bra037845.1-P	Field mustard	nucleus	39.74	39.39
TraesCS4A01G236000.1	Wheat	nucleus	34.93	39.22
Bra031834.1-P	Field mustard	nucleus	40.17	39.15
Bra038219.1-P	Field mustard	nucleus	44.54	38.64
Bra022436.1-P	Field mustard	nucleus	44.1	37.83
HORVU4Hr1G013460.1	Barley	nucleus	35.81	37.44
Os12t0583700-00	Rice	nucleus	39.74	36.84
TraesCS5D01G082700.1	Wheat	nucleus	37.99	36.55
Bra024448.1-P	Field mustard	nucleus	38.43	36.51
TraesCS5A01G070600.1	Wheat	nucleus	38.43	36.51
TraesCS5B01G076400.1	Wheat	nucleus	37.99	36.4
GSMUA_Achr5P08730_001	Banana	nucleus	38.86	36.03
Os03t0610400-01	Rice	nucleus	37.12	35.71
Solyc01g107170.2.1	Tomato	nucleus	45.85	33.87
GSMUA_Achr6P24730_001	Banana	nucleus	38.43	31.88
Zm00001d030858_P001	Maize	nucleus	36.24	29.96
EES16240	Sorghum	nucleus	36.68	28.97
Bra014483.1-P	Field mustard	nucleus	26.2	23.53
Bra040325.1-P	Field mustard	nucleus	27.95	22.78
Bra007545.1-P	Field mustard	nucleus	28.38	21.89
Bra003422.1-P	Field mustard	nucleus	28.38	21.89
Bra000372.1-P	Field mustard	mitochondrion, nucleus	28.82	21.29
Bra018817.1-P	Field mustard	nucleus	32.31	19.84
Bra029315.1-P	Field mustard	nucleus	18.34	18.03
Bra012953.1-P	Field mustard	plastid	20.96	17.45
Bra040741.1-P	Field mustard	nucleus	13.54	14.83
Bra012701.1-P	Field mustard	nucleus, plastid	13.1	14.02
Bra038491.1-P	Field mustard	nucleus	14.85	8.74

Protein Annotations

EnsemblPlants:Bra032845.1	EnsemblPlants:Bra032845.1-P	EnsemblPlantsGene:Bra032845	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF319
PFAM:PF13912	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
UniParc:UPI0002542584	UniProt:M4EVL2	MapMan:15.5.15	:	:	:

Description

AT1G27730 (E=6e-090) STZ, ZAT10 | STZ (salt tolerance zinc finger); nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding

Coordinates

chrA09:+:12448171..12448860

Molecular Weight (calculated)

24570.5 Da

IEP (calculated)

8.394

GRAVY (calculated)

-0.667

Length

229 amino acids

Sequence
(BLAST)

001: MALEAISSPR LASPVPPLLE DSSRFHGVDH WTKGKRSKRS RSDFHHKNLT EEEYLAFCLL LLARDGDRSN RNPLPPPPVT VAEKSSTYTC SVCDKSFSSY
101: QALGGHKASH RKNLSQTLSG GGDDQSTLTT SAATTGSGKS HVCSICHKSF PSGQALGGHK RCHYEGNNNS SSSVANSEGA GSTSHVSSGH RGFDLNIPPV
201: PEFSLVNGDD EVMSPMPAKK PRFDFSEKA

Best Arabidopsis Sequence Match ( AT1G27730.1 )
(BLAST)

001: MALEALTSPR LASPIPPLFE DSSVFHGVEH WTKGKRSKRS RSDFHHQNLT EEEYLAFCLM LLARDNRQPP PPPAVEKLSY KCSVCDKTFS SYQALGGHKA
101: SHRKNLSQTL SGGGDDHSTS SATTTSAVTT GSGKSHVCTI CNKSFPSGQA LGGHKRCHYE GNNNINTSSV SNSEGAGSTS HVSSSHRGFD LNIPPIPEFS
201: MVNGDDEVMS PMPAKKPRFD FPVKLQL

Arabidopsis Description

ZAT10Zinc finger protein ZAT10 [Source:UniProtKB/Swiss-Prot;Acc:Q96289]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.