Factsheet for Bra037845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18661	Canola	nucleus	89.18	99.52
CDX81313	Canola	nucleus	76.62	95.16
Bra031834.1-P	Field mustard	nucleus	87.01	85.53
Bra024448.1-P	Field mustard	nucleus	83.55	80.08
AT5G67450.1	Thale cress	nucleus	83.98	79.18
Bra029985.1-P	Field mustard	nucleus	59.31	61.99
Bra012914.1-P	Field mustard	nucleus	56.71	61.5
Bra033666.1-P	Field mustard	nucleus	37.23	46.49
VIT_07s0129g00240.t01	Wine grape	nucleus	42.86	42.49
Bra010922.1-P	Field mustard	nucleus	40.69	40.34
Bra032845.1-P	Field mustard	nucleus	39.39	39.74
TraesCS4A01G236000.1	Wheat	nucleus	33.77	38.24
TraesCS4B01G079000.1	Wheat	nucleus	35.93	37.73
TraesCS4D01G077900.1	Wheat	nucleus	35.06	36.99
HORVU4Hr1G013460.1	Barley	nucleus	35.06	36.99
Bra009464.1-P	Field mustard	plastid	36.36	36.84
Bra038219.1-P	Field mustard	nucleus	39.83	34.85
Bra001752.1-P	Field mustard	nucleus	40.26	34.83
TraesCS5B01G076400.1	Wheat	nucleus	35.93	34.73
Bra022436.1-P	Field mustard	nucleus	39.83	34.46
Os03t0610400-01	Rice	nucleus	35.5	34.45
TraesCS5D01G082700.1	Wheat	nucleus	35.06	34.03
TraesCS5A01G070600.1	Wheat	nucleus	35.5	34.02
Os12t0583700-00	Rice	nucleus	33.77	31.58
GSMUA_Achr5P08730_001	Banana	nucleus	33.77	31.58
Zm00001d030858_P001	Maize	nucleus	33.77	28.16
EES16240	Sorghum	nucleus	34.2	27.24
GSMUA_Achr6P24730_001	Banana	nucleus	30.3	25.36
Bra040325.1-P	Field mustard	nucleus	28.14	23.13
Bra014483.1-P	Field mustard	nucleus	24.68	22.35
Bra007545.1-P	Field mustard	nucleus	27.27	21.21
Bra003422.1-P	Field mustard	nucleus	26.41	20.54
Bra000372.1-P	Field mustard	mitochondrion, nucleus	27.27	20.32
Bra018817.1-P	Field mustard	nucleus	30.74	19.03
Bra012953.1-P	Field mustard	plastid	21.64	18.18
Bra029315.1-P	Field mustard	nucleus	18.18	18.03
Bra040741.1-P	Field mustard	nucleus	13.42	14.83
Bra012701.1-P	Field mustard	nucleus, plastid	12.99	14.02
Bra038491.1-P	Field mustard	nucleus	12.55	7.46

Protein Annotations

EnsemblPlants:Bra037845.1	EnsemblPlants:Bra037845.1-P	EnsemblPlantsGene:Bra037845	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF263	PFAM:PF13912
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002541BBB
UniProt:M4F9T1	MapMan:15.5.15	:	:	:	:

Description

AT5G67450 (E=8e-059) AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding

Coordinates

chrA09:+:3856521..3857216

Molecular Weight (calculated)

25028.8 Da

IEP (calculated)

7.880

GRAVY (calculated)

-0.810

Length

231 amino acids

Sequence
(BLAST)

001: MALETLNSPT SATATARPFL RYREEMEPEN LEQWAKRKRT KRQRFDHNQE KTPSEEEYLA LCLLMLARGS TVQSLPPPSL PSSDHRGYKC TVCGKSFSSY
101: QALGGHKTSH RKPVNNTDVP SNQEPFNNTH RNSNGGSVVI NGNGVSQSGK THTCSICFKS FSSGQALGGH KRCHYDGGNN GNGSSSNSVE VIGGSDVSDV
201: DDERSSEQSG IGGHRGFDLN LPADQVTVVI S

Best Arabidopsis Sequence Match ( AT5G67450.1 )
(BLAST)

001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS

Arabidopsis Description

AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.