Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81313 | Canola | nucleus | 64.9 | 85.48 |
| Bra037845.1-P | Field mustard | nucleus | 79.18 | 83.98 |
| CDY37851 | Canola | nucleus | 73.06 | 83.26 |
| CDY18661 | Canola | nucleus | 70.2 | 83.09 |
| CDY43576 | Canola | nucleus | 69.8 | 81.82 |
| Bra031834.1-P | Field mustard | nucleus | 78.37 | 81.7 |
| CDY08718 | Canola | nucleus | 79.18 | 80.5 |
| Bra024448.1-P | Field mustard | nucleus | 79.18 | 80.5 |
| CDY36493 | Canola | nucleus | 75.92 | 77.18 |
| AT3G49930.1 | Thale cress | nucleus | 55.51 | 63.26 |
| AT5G43170.1 | Thale cress | nucleus | 36.33 | 46.11 |
| VIT_07s0129g00240.t01 | Wine grape | nucleus | 40.41 | 42.49 |
| AT1G27730.1 | Thale cress | nucleus | 38.37 | 41.41 |
| AT5G04340.1 | Thale cress | nucleus | 37.96 | 39.08 |
| TraesCS4A01G236000.1 | Wheat | nucleus | 32.24 | 38.73 |
| TraesCS4B01G079000.1 | Wheat | nucleus | 33.47 | 37.27 |
| HORVU4Hr1G013460.1 | Barley | nucleus | 32.65 | 36.53 |
| TraesCS4D01G077900.1 | Wheat | nucleus | 32.65 | 36.53 |
| TraesCS5B01G076400.1 | Wheat | nucleus | 34.69 | 35.56 |
| Os03t0610400-01 | Rice | nucleus | 33.88 | 34.87 |
| TraesCS5A01G070600.1 | Wheat | nucleus | 34.29 | 34.85 |
| TraesCS5D01G082700.1 | Wheat | nucleus | 33.47 | 34.45 |
| AT3G19580.1 | Thale cress | nucleus | 37.96 | 34.07 |
| GSMUA_Achr5P08730_001 | Banana | nucleus | 31.84 | 31.58 |
| Os12t0583700-00 | Rice | nucleus | 31.84 | 31.58 |
| Zm00001d030858_P001 | Maize | nucleus | 33.47 | 29.6 |
| EES16240 | Sorghum | nucleus | 33.06 | 27.93 |
| GSMUA_Achr6P24730_001 | Banana | nucleus | 28.57 | 25.36 |
| AT3G60580.1 | Thale cress | nucleus | 26.94 | 22.92 |
| AT1G02030.1 | Thale cress | nucleus | 24.9 | 22.85 |
| AT2G45120.1 | Thale cress | nucleus | 24.49 | 19.11 |
| AT5G61470.1 | Thale cress | nucleus | 20.41 | 16.45 |
| AT4G16610.1 | Thale cress | nucleus | 11.43 | 13.73 |
| AT1G49900.1 | Thale cress | nucleus | 31.43 | 8.4 |
Protein Annotations
| MapMan:15.5.15 | EntrezGene:836881 | UniProt:A0A178UTI6 | ProteinID:AAM78034.1 | ProteinID:AED98346.1 | EMBL:AK227608 |
| ArrayExpress:AT5G67450 | EnsemblPlantsGene:AT5G67450 | RefSeq:AT5G67450 | TAIR:AT5G67450 | RefSeq:AT5G67450-TAIR-G | EnsemblPlants:AT5G67450.1 |
| TAIR:AT5G67450.1 | Symbol:AZF1 | ProteinID:BAA85108.1 | ProteinID:BAB09030.1 | EMBL:BT003064 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010200 | GO:GO:0042538 |
| GO:GO:0043565 | GO:GO:0045892 | GO:GO:0046872 | InterPro:IPR013087 | RefSeq:NP_201546.1 | ProteinID:OAO96162.1 |
| PFAM:PF13912 | PO:PO:0000003 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF263 | UniProt:Q9SSW1 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000000BEC0 | InterPro:Znf_C2H2_sf |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
AZF1ZF1 [Source:UniProtKB/TrEMBL;Acc:A0A178UTI6]
Coordinates
chr5:-:26918765..26920179
Molecular Weight (calculated)
26472.5 Da
IEP (calculated)
7.891
GRAVY (calculated)
-0.785
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MALETLNSPT ATTTARPLLR YREEMEPENL EQWAKRKRTK RQRFDHGHQN QETNKNLPSE EEYLALCLLM LARGSAVQSP PLPPLPSRAS PSDHRDYKCT
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
101: VCGKSFSSYQ ALGGHKTSHR KPTNTSITSG NQELSNNSHS NSGSVVINVT VNTGNGVSQS GKIHTCSICF KSFASGQALG GHKRCHYDGG NNGNGNGSSS
201: NSVELVAGSD VSDVDNERWS EESAIGGHRG FDLNLPADQV SVTTS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.